RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 RGPD4Q7Z3J3 1758 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 YDJCA8MPS7 323 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 DCDC2CA8MYV0 355 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 WDR64B1ANS9 1081 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 NFIBO00712 420 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 DHX15O43143 795 aaKnown RBP7.5□□□□□ -1.21
TDP1-213ENST00000555880 CYP26A1O43174 497 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 CYP1A2P05177 515 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 MMEP08473 750 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 ALAS1P13196 640 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 HNRNPH1P31943 449 aaKnown RBP7.5□□□□□ -1.21
TDP1-213ENST00000555880 GTF2H1P32780 548 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 MAN1A1P33908 653 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 COILP38432 576 aaPredicted RBP7.5□□□□□ -1.21
TDP1-213ENST00000555880 PTGIRP43119 386 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 RPL21P46778 160 aaKnown RBP7.5□□□□□ -1.21
TDP1-213ENST00000555880 MARCKSL1P49006 195 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 PEX5P50542 639 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 MNAT1P51948 309 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 KRT76Q01546 638 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 CDR2Q01850 454 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 XKR9Q5GH70 373 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 CYFIP1Q7L576 1253 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 SLC47A2Q86VL8 602 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 SLC13A5Q86YT5 568 aaPredicted RBP7.5□□□□□ -1.21
TDP1-213ENST00000555880 C4orf19Q8IY42 314 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 LARGE2Q8N3Y3 721 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 SAMD3Q8N6K7 520 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 FBXL13Q8NEE6 735 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 C7orf43Q8WVR3 580 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 MAIP1Q8WWC4 291 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 SHC3Q92529 594 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 LPAR1Q92633 364 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 KAT2BQ92831 832 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 TATDN2Q93075 761 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 CCDC127Q96BQ5 260 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 SEC16BQ96JE7 1060 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 FAM81BQ96LP2 452 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 CCDC114Q96M63 670 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 XPO6Q96QU8 1125 aaKnown RBP7.5□□□□□ -1.21
TDP1-213ENST00000555880 ZNF341Q9BYN7 854 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 NSRP1Q9H0G5 558 aaKnown RBP7.5□□□□□ -1.21
TDP1-213ENST00000555880 TMEM8AQ9HCN3 771 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 ANKEF1Q9NU02 776 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 GRHL1Q9NZI5 618 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 CNOT8Q9UFF9 292 aaKnown RBP7.5□□□□□ -1.21
TDP1-213ENST00000555880 TBX20Q9UMR3 447 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 PCDHA3Q9Y5H8 950 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 UBIAD1Q9Y5Z9 338 aa7.5□□□□□ -1.21
TDP1-213ENST00000555880 TNS1Q9HBL0 1735 aaKnown RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 GOLGA8IPA6NC78 632 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 C5orf60A6NFR6 353 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 SMIM23A6NLE4 172 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 GOLGA8JA6NMD2 632 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 BACH1O14867 736 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 WDR46O15213 610 aaKnown RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 RAD17O75943 681 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 ADRB2P07550 413 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 PYGMP11217 842 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 RARGP13631 454 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 KRT5P13647 590 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CYP11B1P15538 503 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 DPEP1P16444 411 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CHRNB2P17787 502 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 GPC3P51654 580 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 SLC29A2Q14542 456 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CYP1B1Q16678 543 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 C1orf220Q5T0J3 134 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 ERMARDQ5T6L9 678 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 AADACL2Q6P093 401 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 C6orf89Q6UWU4 347 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 ZDHHC24Q6UX98 284 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 RNF207Q6ZRF8 634 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 TRMT10CQ7L0Y3 403 aaKnown RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 MIGA2Q7L4E1 593 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 ENOSF1Q7L5Y1 443 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 OTUD6AQ7L8S5 288 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 FAM83AQ86UY5 434 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CCDC25Q86WR0 208 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 MAP4K3Q8IVH8 894 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CCDC13Q8IYE1 715 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CPXCR1Q8N123 301 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 C12orf50Q8NA57 414 aaPredicted RBP7.49□□□□□ -1.21
TDP1-213ENST00000555880 IL31RAQ8NI17 732 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CD101Q93033 1021 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 TRIM11Q96F44 468 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 KREMEN1Q96MU8 473 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 PCDHB18PQ96TA0 734 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 TMEM109Q9BVC6 243 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 TMEM39BQ9GZU3 492 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 VPS33BQ9H267 617 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 AZI2Q9H6S1 392 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 CDHR5Q9HBB8 845 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 KMT5AQ9NQR1 393 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.49□□□□□ -1.21
TDP1-213ENST00000555880 HOMER2Q9NSB8 354 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 WBP1LQ9NX94 342 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 COL20A1Q9P218 1284 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 PTPN22Q9Y2R2 807 aa7.49□□□□□ -1.21
TDP1-213ENST00000555880 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms