RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 PCMTD2Q9NV79 361 aa3.63□□□□□ -1.83
MTHFD1-212ENST00000555858 PIH1D1Q9NWS0 290 aaKnown RBP3.63□□□□□ -1.83
MTHFD1-212ENST00000555858 ZNF69Q9UC07 566 aa3.63□□□□□ -1.83
MTHFD1-212ENST00000555858 TRPS1Q9UHF7 1281 aa3.63□□□□□ -1.83
MTHFD1-212ENST00000555858 CROTQ9UKG9 612 aa3.63□□□□□ -1.83
MTHFD1-212ENST00000555858 PCDHGB2Q9Y5G2 931 aa3.63□□□□□ -1.83
MTHFD1-212ENST00000555858 NT5C1B-RDH14C9J2C7 533 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 APOL1O14791 398 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 ADAMTS4O75173 837 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 ALDH1A2O94788 518 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 DDCP20711 480 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 POLD1P28340 1107 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 PRDX5P30044 214 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 GUCY1A2P33402 732 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 ETV4P43268 484 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 STAT5BP51692 787 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 CTXN1P60606 82 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 ATP8B2P98198 1209 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 MTM1Q13496 603 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 PMS2P11Q13670 270 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 BLMHQ13867 455 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 STARD3Q14849 445 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 PUM3Q15397 648 aaKnown RBP3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 CCDC38Q502W7 563 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 KHDC1LQ5JSQ8 128 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 DACT2Q5SW24 774 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 PGBD2Q6P3X8 592 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 LDHAL6AQ6ZMR3 332 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 CLEC14AQ86T13 490 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 ZNF605Q86T29 641 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 ATG4DQ86TL0 474 aaPredicted RBP3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 STK32CQ86UX6 486 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 SESTD1Q86VW0 696 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 LDHDQ86WU2 507 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 SYTL1Q8IYJ3 562 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 ZGPATQ8N5A5 531 aaKnown RBP3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 LINC00482Q8N8I6 264 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 TEX19Q8NA77 164 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 ZSCAN18Q8TBC5 510 aaPredicted RBP3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 KBTBD7Q8WVZ9 684 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 CASKIN2Q8WXE0 1202 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 ANP32EQ9BTT0 268 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 C11orf84Q9BUA3 381 aaPredicted RBP3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 TTLL2Q9BWV7 592 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 SENP6Q9GZR1 1112 aaPredicted RBP3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 MYLK2Q9H1R3 596 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 SIRT5Q9NXA8 310 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 GPRC5DQ9NZD1 345 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 CPNE7Q9UBL6 633 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 AFF4Q9UHB7 1163 aaKnown RBP3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 AJAP1Q9UKB5 411 aaPredicted RBP3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 CDC42EP3Q9UKI2 254 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 PCDHA6Q9UN73 950 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 MAGED2Q9UNF1 606 aaPredicted RBP3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 PCDHGB3Q9Y5G1 929 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 PCDHA5Q9Y5H7 936 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 PCDHA1Q9Y5I3 950 aa3.62□□□□□ -1.83
MTHFD1-212ENST00000555858 A0A1W2PPC4 97 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 F8W8V4 182 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 F2RL2O00254 374 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 TEX33O43247 280 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 ADCY6O43306 1168 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 ITGA10O75578 1167 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 HMGCRP04035 888 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 THP07101 528 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 COL6A1P12109 1028 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 HSD3B1P14060 373 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 IL2RBP14784 551 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 GYPEP15421 78 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 HSPA7P48741 367 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 KCNQ1P51787 676 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 ARFIP2P53365 341 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 TOP3AQ13472 1001 aaPredicted RBP3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 SMAD4Q13485 552 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 KCNMB1Q16558 191 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 MPEG1Q2M385 716 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 ARL13BQ3SXY8 428 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 EMC10Q5UCC4 262 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 TRIM68Q6AZZ1 485 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 TRMT10BQ6PF06 316 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 PPP1R3BQ86XI6 285 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 ZSWIM9Q86XI8 627 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 FAM90A1Q86YD7 464 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 TRMT2AQ8IZ69 625 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 RTKN2Q8IZC4 609 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 MYCT1Q8N699 235 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 LILRA3Q8N6C8 439 aaPredicted RBP3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 PLA2G15Q8NCC3 412 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 OR10H5Q8NGA6 315 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 LPPQ93052 612 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 NMD3Q96D46 503 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 BRIP1Q9BX63 1249 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 TRIM54Q9BYV2 358 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 MRPL46Q9H2W6 279 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 LDAHQ9H6V9 325 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 CNTD2Q9H8S5 307 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 SERHLQ9NQF3 203 aa3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 SIDT1Q9NXL6 827 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-212ENST00000555858 STK32BQ9NY57 414 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms