RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 C3orf58Q8NDZ4 430 aa15.1■□□□□ 0.01
SDR39U1-214ENST00000555778 ACO2Q99798 780 aaKnown RBP15.1■□□□□ 0.01
SDR39U1-214ENST00000555778 MRPL4Q9BYD3 311 aaKnown RBP15.1■□□□□ 0.01
SDR39U1-214ENST00000555778 CHST7Q9NS84 486 aa15.1■□□□□ 0.01
SDR39U1-214ENST00000555778 STK39Q9UEW8 545 aa15.1■□□□□ 0.01
SDR39U1-214ENST00000555778 LIMD1Q9UGP4 676 aa15.1■□□□□ 0.01
SDR39U1-214ENST00000555778 TNFSF13BQ9Y275 285 aa15.1■□□□□ 0.01
SDR39U1-214ENST00000555778 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.1■□□□□ 0.01
SDR39U1-214ENST00000555778 STK24Q9Y6E0 443 aa15.1■□□□□ 0.01
SDR39U1-214ENST00000555778 DOCK6Q96HP0 2047 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 DOCK8Q8NF50 2099 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 CCDC195A0A1B0GUA6 201 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 N4BP1O75113 896 aaKnown RBP15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 CLCNKBP51801 687 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 SLC12A3P55017 1021 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 MTMR3Q13615 1198 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 KARSQ15046 597 aaKnown RBP15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 PSMD5Q16401 504 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 HYIQ5T013 277 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 GPBP1Q86WP2 473 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 RASSF8Q8NHQ8 419 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 SMG7Q92540 1137 aaKnown RBP15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 ASIC4Q96FT7 647 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 ZBTB45Q96K62 511 aaPredicted RBP15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 PPP1R10Q96QC0 940 aaKnown RBP15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 RXFP1Q9HBX9 757 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 CLUHO75153 1309 aa15.09■□□□□ 0.01
SDR39U1-214ENST00000555778 ABLIM1O14639 778 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 MEFVO15553 781 aaPredicted RBP15.08■□□□□ 0
SDR39U1-214ENST00000555778 PLCG1P19174 1290 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 GUCY2CP25092 1073 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 BRCC3P46736 316 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 SF3A1Q15459 793 aaKnown RBP15.08■□□□□ 0
SDR39U1-214ENST00000555778 SPECC1Q5M775 1068 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 IER5LQ5T953 404 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 FAM173BQ6P4H8 233 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 GET4Q7L5D6 327 aaPredicted RBP15.08■□□□□ 0
SDR39U1-214ENST00000555778 SUGP1Q8IWZ8 645 aaKnown RBP15.08■□□□□ 0
SDR39U1-214ENST00000555778 C18orf25Q96B23 403 aaPredicted RBP15.08■□□□□ 0
SDR39U1-214ENST00000555778 ZNF707Q96C28 371 aaPredicted RBP15.08■□□□□ 0
SDR39U1-214ENST00000555778 SNX27Q96L92 541 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 MFSD14AQ96MC6 490 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 REEP2Q9BRK0 252 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 TCHPQ9BT92 498 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 TTPALQ9BTX7 342 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 CCDC94Q9BW85 323 aaPredicted RBP15.08■□□□□ 0
SDR39U1-214ENST00000555778 SORCS3Q9UPU3 1222 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 SSX2IPQ9Y2D8 614 aa15.08■□□□□ 0
SDR39U1-214ENST00000555778 B3GAT3O94766 335 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 PLS3P13797 630 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 TKTP29401 623 aaKnown RBP15.07■□□□□ 0
SDR39U1-214ENST00000555778 GBP2P32456 591 aaPredicted RBP15.07■□□□□ 0
SDR39U1-214ENST00000555778 GRM5P41594 1212 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 MATR3P43243 847 aaKnown RBP eCLIP15.07■□□□□ 0
SDR39U1-214ENST00000555778 YARSP54577 528 aaKnown RBP15.07■□□□□ 0
SDR39U1-214ENST00000555778 CEBPZQ03701 1054 aaKnown RBP15.07■□□□□ 0
SDR39U1-214ENST00000555778 SPAG1Q07617 926 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 STRN3Q13033 797 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 MCM6Q14566 821 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 NOLC1Q14978 699 aaKnown RBP eCLIP15.07■□□□□ 0
SDR39U1-214ENST00000555778 ARSHQ5FYA8 562 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 MPZL3Q6UWV2 235 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 SYT2Q8N9I0 419 aaPredicted RBP15.07■□□□□ 0
SDR39U1-214ENST00000555778 TMEM161BQ8NDZ6 487 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 PRSS33Q8NF86 280 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 BICD1Q96G01 975 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 ZMAT2Q96NC0 199 aaKnown RBP15.07■□□□□ 0
SDR39U1-214ENST00000555778 NT5C3AQ9H0P0 336 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 ZHX3Q9H4I2 956 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 PIDD1Q9HB75 910 aa15.07■□□□□ 0
SDR39U1-214ENST00000555778 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.07■□□□□ 0
SDR39U1-214ENST00000555778 SMIM28A0A1B0GU29 152 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 K7ENM7 598 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 CXCL8P10145 99 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 MAPTP10636 758 aaKnown RBP15.06■□□□□ 0
SDR39U1-214ENST00000555778 MARCKSP29966 332 aaPredicted RBP15.06■□□□□ 0
SDR39U1-214ENST00000555778 NTHL1P78549 312 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 CUL4AQ13619 759 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 ARL6IP4Q66PJ3 421 aaKnown RBP15.06■□□□□ 0
SDR39U1-214ENST00000555778 C15orf39Q6ZRI6 1047 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 USP49Q70CQ1 688 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 BRAPQ7Z569 592 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 APBB1IPQ7Z5R6 666 aaPredicted RBP15.06■□□□□ 0
SDR39U1-214ENST00000555778 FBXL6Q8N531 539 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 LNX1Q8TBB1 728 aaPredicted RBP15.06■□□□□ 0
SDR39U1-214ENST00000555778 RSAD2Q8WXG1 361 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 PIK3R5Q8WYR1 880 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 CLSTN3Q9BQT9 956 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 HAPLN2Q9GZV7 340 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 TMEM134Q9H6X4 195 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 PTPRHQ9HD43 1115 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 TOPORSQ9NS56 1045 aaPredicted RBP15.06■□□□□ 0
SDR39U1-214ENST00000555778 BLOC1S4Q9NUP1 217 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 TUBGCP4Q9UGJ1 667 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 CLIC4Q9Y696 253 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 COL4A3Q01955 1670 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 TSC2P49815 1807 aa15.06■□□□□ 0
SDR39U1-214ENST00000555778 PODXLO00592 558 aa15.05■□□□□ -0
SDR39U1-214ENST00000555778 NARSO43776 548 aaKnown RBP15.05■□□□□ -0
SDR39U1-214ENST00000555778 KRT18P05783 430 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms