RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 XYLBO75191 536 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 AFPP02771 609 aaKnown RBP12.91□□□□□ -0.34
ABCD4-222ENST00000555617 ALDH2P05091 517 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 HLA-EP13747 358 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 ITPKAP23677 461 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 DGKEP52429 567 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 LIN9Q5TKA1 542 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 PEAR1Q5VY43 1037 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-222ENST00000555617 RALGPS2Q86X27 583 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-222ENST00000555617 CSGALNACT1Q8TDX6 532 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 MSANTD3Q96H12 275 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 FNBP1Q96RU3 617 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 CLSTN3Q9BQT9 956 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 TMEM175Q9BSA9 504 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.91□□□□□ -0.349e-7■■■□□ 18.5
ABCD4-222ENST00000555617 PILRBQ9UKJ0 227 aa12.91□□□□□ -0.34
ABCD4-222ENST00000555617 HEMK1Q9Y5R4 338 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-222ENST00000555617 TDRD15B5MCY1 1934 aaKnown RBP12.91□□□□□ -0.34
ABCD4-222ENST00000555617 CARNS1A5YM72 827 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 GOLGA8CPA6NN73 597 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 GPAA1O43292 621 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 RNF40O75150 1001 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 APBB3O95704 486 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 POMCP01189 267 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 POU2F2P09086 479 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 TNFRSF8P28908 595 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 MYO1EQ12965 1108 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 RTP2Q5QGT7 225 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 CMTR1Q8N1G2 835 aaKnown RBP12.9□□□□□ -0.34
ABCD4-222ENST00000555617 DEPDC1BQ8WUY9 529 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 LRRC3BQ96PB8 259 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 FAM117AQ9C073 453 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 JMJD4Q9H9V9 463 aa12.9□□□□□ -0.34
ABCD4-222ENST00000555617 MED13Q9UHV7 2174 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 HEPACAM2A8MVW5 462 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 TNFRSF10BO14763 440 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 RANBP6O60518 1105 aaKnown RBP12.89□□□□□ -0.35
ABCD4-222ENST00000555617 MOSPD3O75425 235 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 C22orf31O95567 290 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 GRNP28799 593 aaKnown RBP12.89□□□□□ -0.35
ABCD4-222ENST00000555617 NLRP11P59045 1033 aaKnown RBP12.89□□□□□ -0.35
ABCD4-222ENST00000555617 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-222ENST00000555617 C2orf27AQ580R0 203 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 NAIF1Q69YI7 327 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-222ENST00000555617 ZNF746Q6NUN9 644 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-222ENST00000555617 GPIHBP1Q8IV16 184 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 MFSD6LQ8IWD5 586 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 COLGALT2Q8IYK4 626 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 EXD3Q8N9H8 876 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 BAHD1Q8TBE0 780 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-222ENST00000555617 RLN3Q8WXF3 142 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 SMARCD2Q92925 531 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 APOL6Q9BWW8 343 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 C1orf115Q9H7X2 142 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 SLC6A14Q9UN76 642 aa12.89□□□□□ -0.35
ABCD4-222ENST00000555617 MED13LQ71F56 2210 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 EGFP01133 1207 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 ITGB2P05107 769 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 CLCN3P51790 818 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 TNK2Q07912 1038 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 SMAD1Q15797 465 aaKnown RBP12.88□□□□□ -0.35
ABCD4-222ENST00000555617 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-222ENST00000555617 KIAA1614Q5VZ46 1190 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 C1orf228Q6PIY5 440 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 NFXL1Q6ZNB6 911 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 ATG14Q6ZNE5 492 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 TSC1Q92574 1164 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 RABGGTAQ92696 567 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 NXPE2Q96DL1 559 aa12.88□□□□□ -0.35
ABCD4-222ENST00000555617 FBRSL1Q9HCM7 1045 aaKnown RBP12.88□□□□□ -0.35
ABCD4-222ENST00000555617 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.88□□□□□ -0.35
ABCD4-222ENST00000555617 PLEKHB1Q9UF11 243 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-222ENST00000555617 BAZ2BQ9UIF8 2168 aaKnown RBP12.88□□□□□ -0.35
ABCD4-222ENST00000555617 ANTXRLA6NF34 631 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 ARHGAP33O14559 1287 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 FOXP2O15409 715 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 SUV39H1O43463 412 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 APPP05067 770 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 GJA1P17302 382 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 EIF4BP23588 611 aaKnown RBP12.87□□□□□ -0.35
ABCD4-222ENST00000555617 OR1G1P47890 313 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 GFPT1Q06210 699 aaPredicted RBP12.87□□□□□ -0.35
ABCD4-222ENST00000555617 GALNT15Q8N3T1 639 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 EZH1Q92800 747 aaPredicted RBP12.87□□□□□ -0.35
ABCD4-222ENST00000555617 PRDM16Q9HAZ2 1276 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 VAT1LQ9HCJ6 419 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 AVENQ9NQS1 362 aaPredicted RBP12.87□□□□□ -0.35
ABCD4-222ENST00000555617 EXOC6BQ9Y2D4 811 aa12.87□□□□□ -0.35
ABCD4-222ENST00000555617 SERPINF2P08697 491 aa12.86□□□□□ -0.35
ABCD4-222ENST00000555617 DMC1Q14565 340 aa12.86□□□□□ -0.35
ABCD4-222ENST00000555617 USP39Q53GS9 565 aaKnown RBP12.86□□□□□ -0.35
ABCD4-222ENST00000555617 TMEM196Q5HYL7 178 aa12.86□□□□□ -0.35
ABCD4-222ENST00000555617 FUT10Q6P4F1 479 aa12.86□□□□□ -0.35
ABCD4-222ENST00000555617 ERICH1Q86X53 443 aa12.86□□□□□ -0.35
ABCD4-222ENST00000555617 BAP1Q92560 729 aa12.86□□□□□ -0.35
ABCD4-222ENST00000555617 TMEM209Q96SK2 561 aa12.86□□□□□ -0.35
ABCD4-222ENST00000555617 API5Q9BZZ5 524 aaKnown RBP12.86□□□□□ -0.35
ABCD4-222ENST00000555617 CSRNP2Q9H175 543 aa12.86□□□□□ -0.35
ABCD4-222ENST00000555617 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms