RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 AXDND1Q5T1B0 1012 aaPredicted RBP22.45■■□□□ 1.18
VTI1B-205ENST00000555543 FUT10Q6P4F1 479 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 SYCE2Q6PIF2 218 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 SHC4Q6S5L8 630 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 ALKAL1Q6UXT8 129 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 SV2BQ7L1I2 683 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 SFR1Q86XK3 245 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 HASPINQ8TF76 798 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 BICD1Q96G01 975 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 SNX27Q96L92 541 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 FAM50BQ9Y247 325 aa22.45■■□□□ 1.18
VTI1B-205ENST00000555543 USP15Q9Y4E8 981 aaPredicted RBP22.45■■□□□ 1.18
VTI1B-205ENST00000555543 CUTAO60888 179 aa22.44■■□□□ 1.18
VTI1B-205ENST00000555543 URODP06132 367 aa22.44■■□□□ 1.18
VTI1B-205ENST00000555543 CNPP09543 421 aaKnown RBP22.44■■□□□ 1.18
VTI1B-205ENST00000555543 SRGAP2BP0DMP2 458 aa22.44■■□□□ 1.18
VTI1B-205ENST00000555543 EPCAMP16422 314 aa22.44■■□□□ 1.18
VTI1B-205ENST00000555543 IGFBP6P24592 240 aaPredicted RBP22.44■■□□□ 1.18
VTI1B-205ENST00000555543 GLUD2P49448 558 aa22.44■■□□□ 1.18
VTI1B-205ENST00000555543 ZP2Q05996 745 aa22.44■■□□□ 1.18
VTI1B-205ENST00000555543 MCL1Q07820 350 aa22.44■■□□□ 1.18
VTI1B-205ENST00000555543 XKR4Q5GH76 650 aa22.44■■□□□ 1.18
VTI1B-205ENST00000555543 ZMAT2Q96NC0 199 aaKnown RBP22.44■■□□□ 1.18
VTI1B-205ENST00000555543 APOL5Q9BWW9 433 aa22.44■■□□□ 1.18
VTI1B-205ENST00000555543 GOLGA2P5Q9HBQ8 144 aa22.44■■□□□ 1.18
VTI1B-205ENST00000555543 MRPL17Q9NRX2 175 aaKnown RBP22.44■■□□□ 1.18
VTI1B-205ENST00000555543 TOPORSQ9NS56 1045 aaPredicted RBP22.44■■□□□ 1.18
VTI1B-205ENST00000555543 SMIM28A0A1B0GU29 152 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 HNRNPDLO14979 420 aaKnown RBP22.43■■□□□ 1.18
VTI1B-205ENST00000555543 PIGRP01833 764 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 YARSP54577 528 aaKnown RBP22.43■■□□□ 1.18
VTI1B-205ENST00000555543 GTF2BQ00403 316 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 SOX4Q06945 474 aaPredicted RBP22.43■■□□□ 1.18
VTI1B-205ENST00000555543 E2F4Q16254 413 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 ZC2HC1CQ53FD0 456 aaPredicted RBP22.43■■□□□ 1.18
VTI1B-205ENST00000555543 KIAA0319Q5VV43 1072 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 SLC39A4Q6P5W5 647 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 SLC22A17Q8WUG5 538 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 CASP10Q92851 521 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 KHSRPQ92945 711 aaKnown RBP eCLIP22.43■■□□□ 1.18
VTI1B-205ENST00000555543 CHAMP1Q96JM3 812 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 KLHL5Q96PQ7 755 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 S1PR5Q9H228 398 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 CHST7Q9NS84 486 aa22.43■■□□□ 1.18
VTI1B-205ENST00000555543 CLDN3O15551 220 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 SCP2P22307 547 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 LIG4P49917 911 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 DSG1Q02413 1049 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 MAP4K3Q8IVH8 894 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 ADHFE1Q8IWW8 467 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 KCNG4Q8TDN1 519 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 ACAP3Q96P50 834 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 CNTN3Q9P232 1028 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 CDH22Q9UJ99 828 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 PCDHA7Q9UN72 937 aa22.42■■□□□ 1.18
VTI1B-205ENST00000555543 CITO14578 2027 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 SF3B1O75533 1304 aaKnown RBP eCLIP22.41■■□□□ 1.18
VTI1B-205ENST00000555543 FAM189A1O60320 539 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 TADA2AO75478 443 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 MATR3P43243 847 aaKnown RBP eCLIP22.41■■□□□ 1.18
VTI1B-205ENST00000555543 SLC10A6Q3KNW5 377 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 ZBTB41Q5SVQ8 909 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 ATL3Q6DD88 541 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 GJD3Q8N144 294 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 TMEM87AQ8NBN3 555 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 FEZF2Q8TBJ5 459 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 SUSD6Q92537 303 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 STAMQ92783 540 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 EMILIN2Q9BXX0 1053 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 IKZF4Q9H2S9 585 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 ST6GALNAC4Q9H4F1 302 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 PRKAG3Q9UGI9 489 aa22.41■■□□□ 1.18
VTI1B-205ENST00000555543 TISP43B9A030 160 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 TEX28O15482 410 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 PPP1R37O75864 691 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 CXCL8P10145 99 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 KCNE1P15382 129 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 HOXB8P17481 243 aaPredicted RBP22.4■■□□□ 1.18
VTI1B-205ENST00000555543 KLRC2P26717 231 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 SSTR3P32745 418 aaPredicted RBP22.4■■□□□ 1.18
VTI1B-205ENST00000555543 TNFSF9P41273 254 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 CLCN4P51793 760 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 CLCNKBP51801 687 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 USP41Q3LFD5 358 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 RTP2Q5QGT7 225 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 CD300LGQ6UXG3 332 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 ZNF720Q7Z2F6 126 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 C12orf76Q8N812 135 aaPredicted RBP22.4■■□□□ 1.18
VTI1B-205ENST00000555543 C3orf58Q8NDZ4 430 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 C18orf25Q96B23 403 aaPredicted RBP22.4■■□□□ 1.18
VTI1B-205ENST00000555543 STRA6Q9BX79 667 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 RXFP1Q9HBX9 757 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 TBC1D7Q9P0N9 293 aa22.4■■□□□ 1.18
VTI1B-205ENST00000555543 PDCD11Q14690 1871 aaKnown RBP22.39■■□□□ 1.18
VTI1B-205ENST00000555543 FRMD3A2A2Y4 597 aa22.39■■□□□ 1.17
VTI1B-205ENST00000555543 C19orf67A6NJJ6 358 aa22.39■■□□□ 1.17
VTI1B-205ENST00000555543 ANKRD63C9JTQ0 380 aa22.39■■□□□ 1.17
VTI1B-205ENST00000555543 IDEP14735 1019 aa22.39■■□□□ 1.17
VTI1B-205ENST00000555543 ME1P48163 572 aa22.39■■□□□ 1.17
VTI1B-205ENST00000555543 UPP1Q16831 310 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms