RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PTPRZ1P23471 2315 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-229ENST00000554672 REV3LO60673 3130 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 ORC4O43929 436 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 SMIM10L2AP0DMW4 78 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 SMIM10L2BP0DMW5 78 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 SNHG28P0DPA3 235 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 HSPD1P10809 573 aaKnown RBP5.6□□□□□ -1.51
ATXN3-229ENST00000554672 PDHBP11177 359 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 HOXC8P31273 242 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 NRIP1P48552 1158 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 ZNF543Q08ER8 600 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 KCNA1Q09470 495 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 PTPN21Q16825 1174 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 HSDL1Q3SXM5 330 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 USH1GQ495M9 461 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 MCTP2Q6DN12 878 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 SV2BQ7L1I2 683 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 UBALD2Q8IYN6 164 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 ADSSL1Q8N142 457 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 KCT2Q8NC54 265 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 RIN3Q8TB24 985 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 ZNF507Q8TCN5 953 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 MICAL1Q8TDZ2 1067 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 ASB11Q8WXH4 323 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 SUSD6Q92537 303 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 ELMO3Q96BJ8 720 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 ZNF689Q96CS4 500 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-229ENST00000554672 GPATCH3Q96I76 525 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 SEC62Q99442 399 aaKnown RBP5.6□□□□□ -1.51
ATXN3-229ENST00000554672 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 TLE6Q9H808 572 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 MLXIPQ9HAP2 919 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 ZBTB40Q9NUA8 1239 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 COL20A1Q9P218 1284 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 ANAPC4Q9UJX5 808 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 MRPL11Q9Y3B7 192 aaKnown RBP5.6□□□□□ -1.51
ATXN3-229ENST00000554672 BRWD1Q9NSI6 2320 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 SCN10AQ9Y5Y9 1956 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 NAV1Q8NEY1 1877 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 GBF1Q92538 1859 aa5.6□□□□□ -1.51
ATXN3-229ENST00000554672 COL11A1P12107 1806 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-229ENST00000554672 TRANK1O15050 2925 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 ABCB11O95342 1321 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 ADGRA3Q8IWK6 1321 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 FSD2A1L4K1 749 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 PRAMEF27A3QJZ7 478 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 SMARCA5O60264 1052 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-229ENST00000554672 DGKIO75912 1065 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 LRIG2O94898 1065 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 CSPG5O95196 566 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 GGPS1O95749 300 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 CHRNA1P02708 482 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 ITGB1P05556 798 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 CTSHP09668 335 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 DNAJB1P25685 340 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 ALX1Q15699 326 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 ZNF124Q15973 351 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 GPATCH4Q5T3I0 446 aaKnown RBP5.59□□□□□ -1.51
ATXN3-229ENST00000554672 FRMD5Q7Z6J6 570 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 ADGRD2Q7Z7M1 963 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 RBM23Q86U06 439 aaKnown RBP5.59□□□□□ -1.51
ATXN3-229ENST00000554672 ATP8B4Q8TF62 1192 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 POF1BQ8WVV4 589 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 TMEM40Q8WWA1 233 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 NEK1Q96PY6 1258 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 CDCA3Q99618 268 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-229ENST00000554672 FOXQ1Q9C009 403 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 WNT10AQ9GZT5 417 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 UBA5Q9GZZ9 404 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 EHMT1Q9H9B1 1298 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 PXMP2Q9NR77 195 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 TOMM22Q9NS69 142 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 SEMA3GQ9NS98 782 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 SETD4Q9NVD3 440 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 MAP3K20Q9NYL2 800 aaKnown RBP5.59□□□□□ -1.51
ATXN3-229ENST00000554672 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATXN3-229ENST00000554672 BARX2Q9UMQ3 279 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-229ENST00000554672 DDX19BQ9UMR2 479 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 PCDHB5Q9Y5E4 795 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 MYO5AQ9Y4I1 1855 aaKnown RBP5.59□□□□□ -1.51
ATXN3-229ENST00000554672 PARP14Q460N5 1801 aa5.59□□□□□ -1.51
ATXN3-229ENST00000554672 TECTAO75443 2155 aa5.59□□□□□ -1.52
ATXN3-229ENST00000554672 TET1Q8NFU7 2136 aa5.59□□□□□ -1.52
ATXN3-229ENST00000554672 ZNF318Q5VUA4 2279 aa5.58□□□□□ -1.52
ATXN3-229ENST00000554672 ZFHX2Q9C0A1 2572 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-229ENST00000554672 GFRA2O00451 464 aa5.58□□□□□ -1.52
ATXN3-229ENST00000554672 NOP56O00567 594 aaKnown RBP5.58□□□□□ -1.52
ATXN3-229ENST00000554672 PDGFBP01127 241 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-229ENST00000554672 LGALS2P05162 132 aa5.58□□□□□ -1.52
ATXN3-229ENST00000554672 STAG3L1P0CL83 205 aa5.58□□□□□ -1.52
ATXN3-229ENST00000554672 SRGAP2BP0DMP2 458 aa5.58□□□□□ -1.52
ATXN3-229ENST00000554672 MYCLP12524 364 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-229ENST00000554672 HOXB8P17481 243 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-229ENST00000554672 CLCN5P51795 746 aa5.58□□□□□ -1.52
ATXN3-229ENST00000554672 CLCN7P51798 805 aa5.58□□□□□ -1.52
ATXN3-229ENST00000554672 SP2Q02086 613 aa5.58□□□□□ -1.52
ATXN3-229ENST00000554672 UBE3AQ05086 875 aa5.58□□□□□ -1.52
ATXN3-229ENST00000554672 IKZF1Q13422 519 aa5.58□□□□□ -1.52
ATXN3-229ENST00000554672 CDC37Q16543 378 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-229ENST00000554672 RRP12Q5JTH9 1297 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms