RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 STX6O43752 255 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 MAPTP10636 758 aaKnown RBP9.56□□□□□ -0.88
ACTN1-213ENST00000554508 PLCG1P19174 1290 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 DDIT3P35638 169 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 NCKAP1LP55160 1127 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 GRIN1Q05586 938 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 PTPAQ15257 358 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 XKR4Q5GH76 650 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 RARS2Q5T160 578 aaKnown RBP9.56□□□□□ -0.88
ACTN1-213ENST00000554508 PDXDC1Q6P996 788 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 DCLRE1AQ6PJP8 1040 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 MPZL3Q6UWV2 235 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 CYP26C1Q6V0L0 522 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 ZPBP2Q6X784 338 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 GPR149Q86SP6 731 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 GPBP1Q86WP2 473 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 LARP4BQ92615 738 aaKnown RBP9.56□□□□□ -0.88
ACTN1-213ENST00000554508 RAD54LQ92698 747 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 ACAP3Q96P50 834 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 PPP1R10Q96QC0 940 aaKnown RBP9.56□□□□□ -0.88
ACTN1-213ENST00000554508 PAAF1Q9BRP4 392 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 GPR62Q9BZJ7 368 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 PARVGQ9HBI0 331 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 C11orf16Q9NQ32 467 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 BLOC1S4Q9NUP1 217 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 SLC38A7Q9NVC3 462 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 CCDC39Q9UFE4 941 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 MUTYHQ9UIF7 546 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 MTMR6Q9Y217 621 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 CLIC4Q9Y696 253 aa9.56□□□□□ -0.88
ACTN1-213ENST00000554508 NPHP3-ACAD11A0A0J9YXS1 232 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 SMIM28A0A1B0GU29 152 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 ABLIM1O14639 778 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 CLDN3O15551 220 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 TRAPPC3O43617 180 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 TOM1L1O75674 476 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 FAM13AO94988 1023 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 GLUD1P00367 558 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 KRT18P05783 430 aaKnown RBP9.55□□□□□ -0.88
ACTN1-213ENST00000554508 MARCKSP29966 332 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-213ENST00000554508 TXLNAP40222 546 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 ZNF131P52739 623 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 DHX8Q14562 1220 aaKnown RBP9.55□□□□□ -0.88
ACTN1-213ENST00000554508 MCM6Q14566 821 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 SLC39A14Q15043 492 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 KARSQ15046 597 aaKnown RBP9.55□□□□□ -0.88
ACTN1-213ENST00000554508 KYAT1Q16773 422 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 FAM171A1Q5VUB5 890 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 C15orf39Q6ZRI6 1047 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 HAUS6Q7Z4H7 955 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 PLCD3Q8N3E9 789 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 MYCT1Q8N699 235 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 C12orf76Q8N812 135 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-213ENST00000554508 CMASQ8NFW8 434 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-213ENST00000554508 LRRC15Q8TF66 581 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 RIN2Q8WYP3 895 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-213ENST00000554508 PIK3R5Q8WYR1 880 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 RABGGTAQ92696 567 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 EDAQ92838 391 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 DDX27Q96GQ7 796 aaKnown RBP9.55□□□□□ -0.88
ACTN1-213ENST00000554508 REEP2Q9BRK0 252 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 TTPALQ9BTX7 342 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 RHOBTB2Q9BYZ6 727 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 CXCL16Q9H2A7 254 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 PLEKHA4Q9H4M7 779 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 POMKQ9H5K3 350 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 MAN1C1Q9NR34 630 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 STK17AQ9UEE5 414 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 FBXO2Q9UK22 296 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-213ENST00000554508 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 ARIH1Q9Y4X5 557 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-213ENST00000554508 DOCK6Q96HP0 2047 aa9.55□□□□□ -0.88
ACTN1-213ENST00000554508 FAM86C2PA6NEL3 165 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 TRAK2O60296 914 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 B3GAT3O94766 335 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 KIF4AO95239 1232 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 PAPLNO95428 1278 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 KCNE1P15382 129 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 RPL9P32969 192 aaKnown RBP9.54□□□□□ -0.88
ACTN1-213ENST00000554508 OSTNP61366 133 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 ZXDAP98168 799 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 CACNB1Q02641 598 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-213ENST00000554508 CEBPZQ03701 1054 aaKnown RBP9.54□□□□□ -0.88
ACTN1-213ENST00000554508 MCL1Q07820 350 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 NOLC1Q14978 699 aaKnown RBP eCLIP9.54□□□□□ -0.88
ACTN1-213ENST00000554508 UPP1Q16831 310 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 GLRA4Q5JXX5 417 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 FAM173BQ6P4H8 233 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 LILRA6Q6PI73 481 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 TMC5Q6UXY8 1006 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-213ENST00000554508 CEP120Q8N960 986 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 EPSTI1Q96J88 318 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 ZBTB45Q96K62 511 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-213ENST00000554508 SNX27Q96L92 541 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 CNTN3Q9P232 1028 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 CACNG4Q9UBN1 327 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 TBX20Q9UMR3 447 aa9.54□□□□□ -0.88
ACTN1-213ENST00000554508 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms