RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 COL9A1P20849 921 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 CLCN4P51793 760 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 YARSP54577 528 aaKnown RBP12.73□□□□□ -0.37
CCNK-202ENST00000553636 ITIH3Q06033 890 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 NAB2Q15742 525 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 USP41Q3LFD5 358 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 KIAA0319Q5VV43 1072 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 MPZL3Q6UWV2 235 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 TMC5Q6UXY8 1006 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 USP49Q70CQ1 688 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 GLYCTKQ8IVS8 523 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 FEZF2Q8TBJ5 459 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 RIN2Q8WYP3 895 aaPredicted RBP12.73□□□□□ -0.37
CCNK-202ENST00000553636 LARP4BQ92615 738 aaKnown RBP12.73□□□□□ -0.37
CCNK-202ENST00000553636 SNX21Q969T3 373 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 EPSTI1Q96J88 318 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 ZBTB45Q96K62 511 aaPredicted RBP12.73□□□□□ -0.37
CCNK-202ENST00000553636 FBXL18Q96ME1 805 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 USP28Q96RU2 1077 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 NTPCRQ9BSD7 190 aaKnown RBP12.73□□□□□ -0.37
CCNK-202ENST00000553636 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 ADAM7Q9H2U9 754 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 ZHX3Q9H4I2 956 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 POMKQ9H5K3 350 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 SFXN1Q9H9B4 322 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 PTPRHQ9HD43 1115 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 TOPORSQ9NS56 1045 aaPredicted RBP12.73□□□□□ -0.37
CCNK-202ENST00000553636 CHST7Q9NS84 486 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 LARSQ9P2J5 1176 aaKnown RBP12.73□□□□□ -0.37
CCNK-202ENST00000553636 RAPGEFL1Q9UHV5 662 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 ODF2LQ9ULJ1 636 aa12.73□□□□□ -0.37
CCNK-202ENST00000553636 PDCD11Q14690 1871 aaKnown RBP12.73□□□□□ -0.37
CCNK-202ENST00000553636 VWA8A3KMH1 1905 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 K7ENM7 598 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 ABLIM1O14639 778 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 TBCAO75347 108 aaKnown RBP12.72□□□□□ -0.37
CCNK-202ENST00000553636 HSP90AA1P07900 732 aaKnown RBP12.72□□□□□ -0.37
CCNK-202ENST00000553636 PROZP22891 400 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 MTHFRP42898 656 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 MATR3P43243 847 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCNK-202ENST00000553636 NCKAP1LP55160 1127 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 NOLC1Q14978 699 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCNK-202ENST00000553636 SEZ6Q53EL9 994 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 RTP2Q5QGT7 225 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 FAM171A1Q5VUB5 890 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
CCNK-202ENST00000553636 PRSS55Q6UWB4 352 aaPredicted RBP12.72□□□□□ -0.37
CCNK-202ENST00000553636 MYCT1Q8N699 235 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
CCNK-202ENST00000553636 BICD1Q96G01 975 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 RIPOR3Q96MK2 946 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 CLIC6Q96NY7 704 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 NECTIN4Q96NY8 510 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 PPP1R10Q96QC0 940 aaKnown RBP12.72□□□□□ -0.37
CCNK-202ENST00000553636 GOLGA2P5Q9HBQ8 144 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 RXFP1Q9HBX9 757 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 MAN1C1Q9NR34 630 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 KCNG1Q9UIX4 513 aa12.72□□□□□ -0.37
CCNK-202ENST00000553636 SRPRBQ9Y5M8 271 aaKnown RBP12.72□□□□□ -0.37
CCNK-202ENST00000553636 H0YCG3 227 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 GPR37L1O60883 481 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 TOM1L1O75674 476 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 GLUD1P00367 558 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 RPL17P18621 184 aaKnown RBP12.71□□□□□ -0.37
CCNK-202ENST00000553636 IGFBP6P24592 240 aaPredicted RBP12.71□□□□□ -0.37
CCNK-202ENST00000553636 TXLNAP40222 546 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 CLCNKBP51801 687 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 HERC4Q5GLZ8 1057 aaPredicted RBP12.71□□□□□ -0.37
CCNK-202ENST00000553636 ZPBP2Q6X784 338 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 HAUS6Q7Z4H7 955 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 CEP57Q86XR8 500 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 PALB2Q86YC2 1186 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 SNX27Q96L92 541 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 ACAP3Q96P50 834 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 ZSCAN16Q9H4T2 348 aaPredicted RBP12.71□□□□□ -0.37
CCNK-202ENST00000553636 PARVGQ9HBI0 331 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCNK-202ENST00000553636 DAXXQ9UER7 740 aaPredicted RBP12.71□□□□□ -0.37
CCNK-202ENST00000553636 CCDC39Q9UFE4 941 aa12.71□□□□□ -0.37
CCNK-202ENST00000553636 SMIM28A0A1B0GU29 152 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 I3L4J1 428 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 CLDN3O15551 220 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 B3GAT3O94766 335 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 BRD1O95696 1058 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 SPATA31D3P0C874 917 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 LIG4P49917 911 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 ZNF131P52739 623 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 SOX4Q06945 474 aaPredicted RBP12.7□□□□□ -0.38
CCNK-202ENST00000553636 STK38Q15208 465 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 ATAT1Q5SQI0 421 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 RRAGBQ5VZM2 374 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 ELMSAN1Q6PJG2 1045 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 SPATA31D4Q6ZUB0 917 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 ZMAT2Q96NC0 199 aaKnown RBP12.7□□□□□ -0.38
CCNK-202ENST00000553636 TTPALQ9BTX7 342 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 STK17AQ9UEE5 414 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 NR2E1Q9Y466 385 aa12.7□□□□□ -0.38
CCNK-202ENST00000553636 MTCL1Q9Y4B5 1905 aaKnown RBP12.7□□□□□ -0.38
CCNK-202ENST00000553636 C2CD4DB7Z1M9 353 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms