RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PVALEFA0A1B0GWK0 134 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 RBM47A0AV96 593 aaKnown RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 SYCE3A1L190 88 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 SOWAHDA6NJG2 315 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 SMTNL1A8MU46 457 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 NOP56O00567 594 aaKnown RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 FKTNO75072 461 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 SLITRK3O94933 977 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 KIF20AO95235 890 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 LYPLA2O95372 231 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 EYA4O95677 639 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 TBC1D8O95759 1140 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 GH1P01241 217 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 KCNA2P16389 499 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 HSPA6P17066 643 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 PLCG1P19174 1290 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 AFMP43652 599 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 ASPAP45381 313 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 QARSP47897 775 aaKnown RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 SLC26A2P50443 739 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 TPM4P67936 248 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 LACTBP83111 547 aaPredicted RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 SPIRE1Q08AE8 756 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 GRB10Q13322 594 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 STIM1Q13586 685 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 ACVR2BQ13705 512 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 TMEM119Q4V9L6 283 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 RPS26P11Q5JNZ5 115 aaPredicted RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 METTL7BQ6UX53 244 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 B3GNT9Q6UX72 402 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 RBM43Q6ZSC3 357 aaKnown RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 USP49Q70CQ1 688 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 CYFIP1Q7L576 1253 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 EEPD1Q7L9B9 569 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 CCDC65Q8IXS2 484 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 C4orf19Q8IY42 314 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 SYT2Q8N9I0 419 aaPredicted RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 IL31RAQ8NI17 732 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 RAD54LQ92698 747 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 PAGE5Q96GU1 130 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 DYDC2Q96IM9 177 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 CCDC43Q96MW1 224 aaKnown RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 APBA2Q99767 749 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 C7orf25Q9BPX7 421 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 UNC45AQ9H3U1 944 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 GSX1Q9H4S2 264 aaPredicted RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 AZI2Q9H6S1 392 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 ABCB6Q9NP58 842 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 PAK6Q9NQU5 681 aaPredicted RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 ANKEF1Q9NU02 776 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 KBTBD4Q9NVX7 518 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 DDX41Q9UJV9 622 aaKnown RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 GJD2Q9UKL4 321 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 FAM184BQ9ULE4 1060 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 Q9Y3F1 56 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 MGAMO43451 1857 aa5.56□□□□□ -1.52
VTI1B-202ENST00000553619 TMEM238LA0A1B0GVL6 79 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 GOLGA6L3A6NEY3 463 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 DDX39AO00148 427 aaKnown RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 CHMP2AO43633 222 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 ZEB2O60315 1214 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 ATP9AO75110 1047 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 PPFIA4O75335 1185 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 MED24O75448 989 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 GGPS1O95749 300 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 SSBP05455 408 aaKnown RBP eCLIP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 KRT18P05783 430 aaKnown RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 PLA2G4BP0C869 781 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 CYP2B6P20813 491 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 SARSP49591 514 aaKnown RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 STAT5BP51692 787 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 ACTR2P61160 394 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 TNFAIP2Q03169 654 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 ITGB3BPQ13352 177 aaPredicted RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 CTTNQ14247 550 aaKnown RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 KCNB1Q14721 858 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 STX1AQ16623 288 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 GLIPR1L2Q4G1C9 344 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 XKR3Q5GH77 459 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 CELF3Q5SZQ8 465 aaKnown RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 L1TD1Q5T7N2 865 aaKnown RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 NT5DC1Q5TFE4 455 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 SWSAP1Q6NVH7 229 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 CNNM4Q6P4Q7 775 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 SEZ6L2Q6UXD5 910 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 ABHD15Q6UXT9 468 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 STXBP4Q6ZWJ1 553 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 PLPPR4Q7Z2D5 763 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 CKAP2LQ8IYA6 745 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 MLKLQ8NB16 471 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 SLC17A8Q8NDX2 589 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 NPLOC4Q8TAT6 608 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 ANP32BQ92688 251 aaKnown RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 USP6NLQ92738 828 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 GJA10Q969M2 543 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 FAM167AQ96KS9 214 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 PLIN2Q99541 437 aa5.55□□□□□ -1.52
VTI1B-202ENST00000553619 JPH2Q9BR39 696 aaPredicted RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 MMTAG2Q9BU76 263 aaKnown RBP5.55□□□□□ -1.52
VTI1B-202ENST00000553619 TIPINQ9BVW5 301 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms