RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 MAPK6Q16659 721 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 FAM187BQ17R55 369 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 GJC2Q5T442 439 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 TDRD10Q5VZ19 366 aaKnown RBP10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 WDR93Q6P2C0 686 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 TMCO3Q6UWJ1 677 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 PALB2Q86YC2 1186 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 BRSK2Q8IWQ3 736 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 PPM1KQ8N3J5 372 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 SPATA4Q8NEY3 305 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 TRAPPC12Q8WVT3 735 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 ARHGEF26Q96DR7 871 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 ZCCHC17Q9NP64 241 aaKnown RBP10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 RBAKQ9NYW8 714 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 CPSF3Q9UKF6 684 aaKnown RBP10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 CNTN6Q9UQ52 1028 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 TRPC6Q9Y210 931 aa10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 ZNFX1Q9P2E3 1918 aaKnown RBP10.11□□□□□ -0.79
MTHFD1-203ENST00000553391 MYH9P35579 1960 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 MANSC4A6NHS7 340 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 TMCO5BA8MYB1 307 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 MTA2O94776 668 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 CST3P01034 146 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 IGHA2P01877 340 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 RHOXF2BP0C7M4 288 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 CYP11B1P15538 503 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 USP8P40818 1118 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 BPIFB4P59827 614 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 CDR2Q01850 454 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 POU5F1Q01860 360 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 MBTD1Q05BQ5 628 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 CFAP221Q4G0U5 840 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 WDR44Q5JSH3 913 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 BEND6Q5SZJ8 279 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 ACAD10Q6JQN1 1059 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 C17orf99Q6UX52 265 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 CCNI2Q6ZMN8 369 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 NT5DC3Q86UY8 548 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 SLC47A2Q86VL8 602 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 RHPN2Q8IUC4 686 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 SYCE1Q8N0S2 351 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 OR5B17Q8NGF7 314 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 EPS8L1Q8TE68 723 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 RFFLQ8WZ73 363 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 USP6NLQ92738 828 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 FAM84AQ96KN4 292 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 RHOXF2Q9BQY4 288 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 PI4K2AQ9BTU6 479 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 APOBEC3GQ9HC16 384 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 SLC5A4Q9NY91 659 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 TNFSF13BQ9Y275 285 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 COL1A2P08123 1366 aa10.1□□□□□ -0.79
MTHFD1-203ENST00000553391 PTPRJQ12913 1337 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 MAP2K7O14733 419 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 CYP1A2P05177 515 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 GJB1P08034 283 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 HOXC6P09630 235 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 CXCR5P32302 372 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 TNFSF9P41273 254 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 MATR3P43243 847 aaKnown RBP eCLIP10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 CLCN3P51790 818 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 HUNKP57058 714 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 MAP2K5Q13163 448 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 AMHR2Q16671 573 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 SEZ6Q53EL9 994 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 ATF7IP2Q5U623 682 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 EEF1DP3Q658K8 133 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 LMBRD2Q68DH5 695 aaPredicted RBP10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 SCARA3Q6AZY7 606 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 MTHFD1LQ6UB35 978 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 MPZL3Q6UWV2 235 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 ZBTB33Q86T24 672 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 ZNF677Q86XU0 584 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 WDR49Q8IV35 697 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 RHOT2Q8IXI1 618 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 UBR7Q8N806 425 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 CAGE1Q8TC20 777 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 CTNNBL1Q8WYA6 563 aaPredicted RBP10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 TAF4BQ92750 862 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 ELMO3Q96BJ8 720 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 ZBTB10Q96DT7 871 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 HES6Q96HZ4 224 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 MS4A14Q96JA4 679 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 TCHPQ9BT92 498 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 FUT8Q9BYC5 575 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 THAP2Q9H0W7 228 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 MINDY3Q9H8M7 445 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 IFT122Q9HBG6 1241 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 ACP6Q9NPH0 428 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 PRMT7Q9NVM4 692 aaPredicted RBP10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 CPA4Q9UI42 421 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 TMEM59LQ9UK28 342 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 AMFRQ9UKV5 643 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 L1RE1Q9UN81 338 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 COG5Q9UP83 839 aa10.09□□□□□ -0.79
MTHFD1-203ENST00000553391 ARID2Q68CP9 1835 aa10.08□□□□□ -0.8
MTHFD1-203ENST00000553391 RRN3P2A6NIE6 340 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms