RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 COL1A2P08123 1366 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 PLXNA4Q9HCM2 1894 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 PNMA6FA0A0J9YX94 578 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 K7ESF4 209 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 BACH1O14867 736 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 OFD1O75665 1012 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 FGAP02671 866 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 CAPNS1P04632 268 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 CHRNB1P11230 501 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 KCNA2P16389 499 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 PHKA2P46019 1235 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 SLC11A1P49279 550 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 RAB27AP51159 221 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 DSG1Q02413 1049 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 CREB5Q02930 508 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 MTMR1Q13613 665 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 ZNF423Q2M1K9 1284 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 UAP1L1Q3KQV9 507 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 USP41Q3LFD5 358 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 PPM1LQ5SGD2 360 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 ZMYM1Q5SVZ6 1142 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 LIN9Q5TKA1 542 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 ALKBH2Q6NS38 261 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 PDXDC1Q6P996 788 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 AGMOQ6ZNB7 445 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 KBTBD6Q86V97 674 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 ZNF687Q8N1G0 1237 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 RNF34Q969K3 372 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 MTMR8Q96EF0 704 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 SEC62Q99442 399 aaKnown RBP5.84□□□□□ -1.47
CKAP4-203ENST00000553039 PCYT2Q99447 389 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 C8orf33Q9H7E9 229 aaPredicted RBP5.84□□□□□ -1.47
CKAP4-203ENST00000553039 UBN1Q9NPG3 1134 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 ZNF358Q9NW07 568 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 KLK13Q9UKR3 277 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 BRPF3Q9ULD4 1205 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 POLIQ9UNA4 740 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 AKT3Q9Y243 479 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 INPP5FQ9Y2H2 1132 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 MRPS23Q9Y3D9 190 aaKnown RBP5.84□□□□□ -1.47
CKAP4-203ENST00000553039 F5P12259 2224 aa5.84□□□□□ -1.47
CKAP4-203ENST00000553039 CYSRT1A8MQ03 144 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 NRP1O14786 923 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF263O14978 683 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 PSMC3P17980 439 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 CCNE1P24864 410 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 MPSTP25325 297 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 HOXA9P31269 272 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 ACTR2P61160 394 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 SIM1P81133 766 aaPredicted RBP5.83□□□□□ -1.48
CKAP4-203ENST00000553039 EHHADHQ08426 723 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 LMAN2Q12907 356 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 NAA30Q147X3 362 aaPredicted RBP5.83□□□□□ -1.48
CKAP4-203ENST00000553039 TWF2Q6IBS0 349 aaKnown RBP5.83□□□□□ -1.48
CKAP4-203ENST00000553039 KIAA1211LQ6NV74 962 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 EFCAB12Q6NXP0 572 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 C11orf74Q86VG3 221 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF280BQ86YH2 543 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 CKAP2LQ8IYA6 745 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 CAMKK1Q8N5S9 505 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 DEFB124Q8NES8 71 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 CSGALNACT1Q8TDX6 532 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 E2F7Q96AV8 911 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 MCRS1Q96EZ8 462 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 SCLT1Q96NL6 688 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 ZSCAN10Q96SZ4 725 aaPredicted RBP5.83□□□□□ -1.48
CKAP4-203ENST00000553039 KIF2CQ99661 725 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 DUSP9Q99956 384 aaKnown RBP5.83□□□□□ -1.48
CKAP4-203ENST00000553039 HERC2P3Q9BVR0 1158 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 VN1R3Q9BXE9 311 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 GCOM2Q9BZD3 368 aaPredicted RBP5.83□□□□□ -1.48
CKAP4-203ENST00000553039 CLMPQ9H6B4 373 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF334Q9HCZ1 680 aaPredicted RBP5.83□□□□□ -1.48
CKAP4-203ENST00000553039 JADE2Q9NQC1 790 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 CHST7Q9NS84 486 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 NRBP2Q9NSY0 501 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 DNAJB4Q9UDY4 337 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 SLC8A2Q9UPR5 921 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 TNNQ9UQP3 1299 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 PIAS3Q9Y6X2 628 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 URB1O60287 2271 aaKnown RBP5.83□□□□□ -1.48
CKAP4-203ENST00000553039 LCTP09848 1927 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 ASPMQ8IZT6 3477 aa5.83□□□□□ -1.48
CKAP4-203ENST00000553039 RALGAPA1Q6GYQ0 2036 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 KIAA1217Q5T5P2 1943 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 FRMPD4Q14CM0 1322 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 BCLAF3A2AJT9 711 aaKnown RBP5.82□□□□□ -1.48
CKAP4-203ENST00000553039 UPK3BL1B0FP48 263 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 UPK3BL2E5RIL1 263 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF197O14709 1029 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 FZD6O60353 706 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 VTNP04004 478 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 POU2F2P09086 479 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 DARSP14868 501 aaKnown RBP5.82□□□□□ -1.48
CKAP4-203ENST00000553039 ITGB5P18084 799 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 OR1G1P47890 313 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 DNM2P50570 870 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 KPNA1P52294 538 aaPredicted RBP5.82□□□□□ -1.48
CKAP4-203ENST00000553039 EPHA4P54764 986 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 PLK5Q496M5 336 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms