RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 FSHRP23945 695 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 CDC25AP30304 524 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 TOB1P50616 345 aaPredicted RBP12.63□□□□□ -0.39
NEK3-204ENST00000552973 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
NEK3-204ENST00000552973 CLCNKBP51801 687 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 OSTNP61366 133 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 HMGN5P82970 282 aaKnown RBP12.63□□□□□ -0.39
NEK3-204ENST00000552973 CREMQ03060 361 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 PTGDRQ13258 359 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 ORC2Q13416 577 aaPredicted RBP12.63□□□□□ -0.39
NEK3-204ENST00000552973 PPM1LQ5SGD2 360 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 LIN9Q5TKA1 542 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 FRMD5Q7Z6J6 570 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 CEP120Q8N960 986 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 GPR152Q8TDT2 470 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 PIK3R5Q8WYR1 880 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 ZSCAN31Q96LW9 406 aaPredicted RBP12.63□□□□□ -0.39
NEK3-204ENST00000552973 WNT16Q9UBV4 365 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 FBXW11Q9UKB1 542 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 PCDHB6Q9Y5E3 794 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 NUMBLQ9Y6R0 609 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 ZMYM2Q9UBW7 1377 aa12.63□□□□□ -0.39
NEK3-204ENST00000552973 C1RP00736 705 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 SRFP11831 508 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 MUTP22033 750 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 OR1D2P34982 312 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 NBL1P41271 181 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 BRCC3P46736 316 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 TRAPPC10P48553 1259 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 EFNA5P52803 228 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 PEX3P56589 373 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 ZRSR1Q15695 479 aaKnown RBP12.62□□□□□ -0.39
NEK3-204ENST00000552973 IL17AQ16552 155 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 DCAF4L1Q3SXM0 396 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 SPECC1Q5M775 1068 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 CD300LGQ6UXG3 332 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 RSPO2Q6UXX9 243 aaPredicted RBP12.62□□□□□ -0.39
NEK3-204ENST00000552973 CCDC105Q8IYK2 499 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 DTWD2Q8NBA8 298 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 KIFAP3Q92845 792 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 KIF2CQ99661 725 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 RTP3Q9BQQ7 232 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.62□□□□□ -0.39
NEK3-204ENST00000552973 WDFY4Q6ZS81 3184 aa12.62□□□□□ -0.39
NEK3-204ENST00000552973 ARID2Q68CP9 1835 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 PRR23AA6NEV1 266 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 SFI1A8K8P3 1242 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 PROB1E7EW31 1015 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 HIP1RO75146 1068 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 PAPLNO95428 1278 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 HARSP12081 509 aaKnown RBP12.61□□□□□ -0.39
NEK3-204ENST00000552973 FGFR3P22607 806 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 TKTP29401 623 aaKnown RBP12.61□□□□□ -0.39
NEK3-204ENST00000552973 NPTX2P47972 431 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 ELAVL2Q12926 359 aaKnown RBP12.61□□□□□ -0.39
NEK3-204ENST00000552973 HTR4Q13639 388 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 ANGPT1Q15389 498 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 AXDND1Q5T1B0 1012 aaPredicted RBP12.61□□□□□ -0.39
NEK3-204ENST00000552973 ERICH6BQ5W0A0 696 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 KRT79Q5XKE5 535 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 DCLRE1AQ6PJP8 1040 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 PARM1Q6UWI2 310 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.61□□□□□ -0.39
NEK3-204ENST00000552973 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 ITFG1Q8TB96 612 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 SLC7A14Q8TBB6 771 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 FGF14Q92915 247 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 NXPE3Q969Y0 559 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 PPP1R10Q96QC0 940 aaKnown RBP12.61□□□□□ -0.39
NEK3-204ENST00000552973 RUSC1Q9BVN2 902 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 TARS2Q9BW92 718 aaKnown RBP12.61□□□□□ -0.39
NEK3-204ENST00000552973 TBC1D17Q9HA65 648 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 HCFC1R1Q9NWW0 138 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 DNM3Q9UQ16 869 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 TNFSF13BQ9Y275 285 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 CDY1Q9Y6F8 540 aa12.61□□□□□ -0.39
NEK3-204ENST00000552973 MYO10Q9HD67 2058 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 SMIM28A0A1B0GU29 152 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 ANHXE9PGG2 379 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 DCNP07585 359 aaKnown RBP12.6□□□□□ -0.39
NEK3-204ENST00000552973 U2AF2P26368 475 aaKnown RBP eCLIP12.6□□□□□ -0.391e-7■■□□□ 13.2
NEK3-204ENST00000552973 GPC5P78333 572 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 SOX4Q06945 474 aaPredicted RBP12.6□□□□□ -0.39
NEK3-204ENST00000552973 RAD51AP2Q09MP3 1159 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 RAB33AQ14088 237 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 PDIA5Q14554 519 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 UPP1Q16831 310 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 ZNF568Q3ZCX4 644 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 RINT1Q6NUQ1 792 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 TAS1R3Q7RTX0 852 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 KCNK18Q7Z418 384 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 DAW1Q8N136 415 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 IGSF22Q8N9C0 903 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 NKD2Q969F2 451 aaPredicted RBP12.6□□□□□ -0.39
NEK3-204ENST00000552973 PLIN2Q99541 437 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 ACO2Q99798 780 aaKnown RBP12.6□□□□□ -0.39
NEK3-204ENST00000552973 TCHPQ9BT92 498 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 CCDC94Q9BW85 323 aaPredicted RBP12.6□□□□□ -0.39
NEK3-204ENST00000552973 CDT1Q9H211 546 aa12.6□□□□□ -0.39
NEK3-204ENST00000552973 KMT5AQ9NQR1 393 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms