RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	ZNF577	Q9BSK1	485 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	FOXP1	Q9H334	677 aa	Predicted RBP	7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	PIDD1	Q9HB75	910 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	KCNMB3	Q9NPA1	279 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	KRT82	Q9NSB4	513 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	TBC1D22B	Q9NU19	505 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	TBX21	Q9UL17	535 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	SMC3	Q9UQE7	1217 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	OAS3	Q9Y6K5	1087 aa	Known RBP	7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	COL6A3	P12111	3177 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	GSTTP1	A0A1W2PQM5	241 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	KIF28P	B7ZC32	967 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	DDX39A	O00148	427 aa	Known RBP	7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	KIAA0355	O15063	1070 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	GAS7	O60861	476 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	PSMD10	O75832	226 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	HOXC8	P31273	242 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	CYP27A1	Q02318	531 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	PTPN11	Q06124	597 aa	Predicted RBP	7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	ZNF746	Q6NUN9	644 aa	Predicted RBP	7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	NOSTRIN	Q8IVI9	506 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	SMAP1	Q8IYB5	467 aa	Predicted RBP	7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	SEPT1	Q8WYJ6	367 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	GATA6	Q92908	595 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	INTS4	Q96HW7	963 aa	Known RBP	7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	CTAGE1	Q96RT6	745 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	PCYT2	Q99447	389 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	RIT2	Q99578	217 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	NAP1L4	Q99733	375 aa	Known RBP	7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	ATXN3L	Q9H3M9	355 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	TRMT13	Q9NUP7	481 aa	Known RBP	7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	CRIM1	Q9NZV1	1036 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	DDX25	Q9UHL0	483 aa	Known RBP	7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	GTF2IRD1	Q9UHL9	959 aa		7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	ZNF215	Q9UL58	517 aa	Predicted RBP	7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	7.49	□□□□□ -1.21
CNOT2-238	ENST00000552422	PRUNE2	Q8WUY3	3088 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	IGKV6D-21	A0A0A0MT36	114 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	TRIM43B	A6NCK2	446 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	TBX3	O15119	743 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	TLR3	O15455	904 aa	Known RBP	7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	CCNT1	O60563	726 aa	Known RBP	7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	SYN1	P17600	705 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	ITGB8	P26012	769 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	GSTT1	P30711	240 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	TRAPPC10	P48553	1259 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	IRAK1	P51617	712 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	MSMP	Q1L6U9	139 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	FAM47C	Q5HY64	1035 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	LRCH2	Q5VUJ6	765 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	MCTP1	Q6DN14	999 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	ALG1L	Q6GMV1	187 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	B3GNT9	Q6UX72	402 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	ABHD15	Q6UXT9	468 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	ZNF765	Q7L2R6	523 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	CCDC60	Q8IWA6	550 aa	Predicted RBP	7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	C7orf31	Q8N865	590 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	PPP1R13L	Q8WUF5	828 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	GJA10	Q969M2	543 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	TRIM43	Q96BQ3	446 aa	Predicted RBP	7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	FAM20A	Q96MK3	541 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	FANCD2OS	Q96PS1	177 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	UIMC1	Q96RL1	719 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	TRAIP	Q9BWF2	469 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	TRPV6	Q9H1D0	765 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	PRO3102	Q9H379	93 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	SMARCAD1	Q9H4L7	1026 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	LRRC4C	Q9HCJ2	640 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	PRDM5	Q9NQX1	630 aa	Predicted RBP	7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	ERAP1	Q9NZ08	941 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	HDAC6	Q9UBN7	1215 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	TCEAL9	Q9UHQ7	104 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	REV3L	O60673	3130 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	IGSF9B	Q9UPX0	1349 aa		7.48	□□□□□ -1.21
CNOT2-238	ENST00000552422	NLRC5	Q86WI3	1866 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422		H3BQV1	296 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	NEMF	O60524	1076 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	RNGTT	O60942	597 aa	Known RBP	7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	SUPT20HL2	P0C7V6	817 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	SMIM10L2A	P0DMW4	78 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	SMIM10L2B	P0DMW5	78 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	PDC	P20941	246 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	ARNT	P27540	789 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	SFN	P31947	248 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	MAGEA10	P43363	369 aa	Predicted RBP	7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	SLC26A2	P50443	739 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	CHMP4BP1	P59074	171 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	ADAM17	P78536	824 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	SPIRE1	Q08AE8	756 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	PPP2R5C	Q13362	524 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	ORC2	Q13416	577 aa	Predicted RBP	7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	GNL2	Q13823	731 aa	Known RBP	7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	PTGIS	Q16647	500 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	UTP14C	Q5TAP6	766 aa	Known RBP	7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	LARP1B	Q659C4	914 aa	Known RBP	7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	MIS18BP1	Q6P0N0	1132 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	PLPPR4	Q7Z2D5	763 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	PDZD3	Q86UT5	571 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	HSCB	Q8IWL3	235 aa		7.47	□□□□□ -1.21
CNOT2-238	ENST00000552422	SLFN12	Q8IYM2	578 aa		7.47	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms