RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 FSCN2O14926 492 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 CASP1P29466 404 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 CUL4BQ13620 913 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 POSTNQ15063 836 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 AAK1Q2M2I8 961 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 SEZ6Q53EL9 994 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 BCL7CQ8WUZ0 217 aaPredicted RBP20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 PAGE5Q96GU1 130 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 IGFLR1Q9H665 355 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 TMEM206Q9H813 350 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 PCDHGC5Q9Y5F6 944 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 EYSQ5T1H1 3165 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 BRWD1Q9NSI6 2320 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 A0A0B4J269 797 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 PVALEFA0A1B0GWK0 134 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 FSD2A1L4K1 749 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 PRPF6O94906 941 aaKnown RBP20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 MYL1P05976 194 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 CXCL8P10145 99 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 NRIP1P48552 1158 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 CASP5P51878 434 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 PPP2R3AQ06190 1150 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 HSP90AA2PQ14568 343 aaPredicted RBP20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 SLC39A4Q6P5W5 647 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 ADGRD2Q7Z7M1 963 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 RBM23Q86U06 439 aaKnown RBP20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 POMGNT1Q8WZA1 660 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 CCDC47Q96A33 483 aaKnown RBP20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 STRA6Q9BX79 667 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 ZBP1Q9H171 429 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 GOLPH3LQ9H4A5 285 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 UBE2ZQ9H832 354 aaPredicted RBP20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 RPF1Q9H9Y2 349 aaKnown RBP20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 EXOC1Q9NV70 894 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 MARCH5Q9NX47 278 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 CLDND1Q9NY35 253 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 TRIP11Q15643 1979 aa20.15■□□□□ 0.82
PRPF40B-216ENST00000552301 SMIM28A0A1B0GU29 152 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 ANKRD63C9JTQ0 380 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 TADA2AO75478 443 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 URODP06132 367 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 HYAL1Q12794 435 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 ATXN2LQ8WWM7 1075 aaKnown RBP20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 HPS3Q969F9 1004 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 PABPC5Q96DU9 382 aaKnown RBP20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 UROC1Q96N76 676 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 PPP1R10Q96QC0 940 aaKnown RBP20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 CDCA3Q99618 268 aaPredicted RBP20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 FGFBP2Q9BYJ0 223 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 HAPLN2Q9GZV7 340 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 CXCL16Q9H2A7 254 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 PLEKHA5Q9HAU0 1116 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 CNTN3Q9P232 1028 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 ADAM28Q9UKQ2 775 aa20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 AGO2Q9UKV8 859 aaKnown RBP20.14■□□□□ 0.81
PRPF40B-216ENST00000552301 SF3B1O75533 1304 aaKnown RBP eCLIP20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 UBE4BO95155 1302 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 TISP43B9A030 160 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 EIF3DO15371 548 aaKnown RBP eCLIP20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 ZNF202O95125 648 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 CXCL14O95715 111 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 SOD2P04179 222 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 CTSAP10619 480 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 KCNE1P15382 129 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 KCNA5P22460 613 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 MRPS5P82675 430 aaKnown RBP20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 KCNA1Q09470 495 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 XKR4Q5GH76 650 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 KIAA1841Q6NSI8 718 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 FUT10Q6P4F1 479 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 KRBA2Q6ZNG9 492 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 RABGGTAQ92696 567 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 FAM212AQ96EL1 285 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 HERC2P3Q9BVR0 1158 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 CACNG4Q9UBN1 327 aa20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.13■□□□□ 0.81
PRPF40B-216ENST00000552301 DLL1O00548 723 aa20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 XPOTO43592 962 aaKnown RBP20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 SRGAP2BP0DMP2 458 aa20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 TNFSF9P41273 254 aa20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 NDUFV1P49821 464 aa20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 DUSP6Q16828 381 aa20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 SLC10A6Q3KNW5 377 aa20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 KANK3Q6NY19 840 aa20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 ALKAL1Q6UXT8 129 aa20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 MRPL43Q8N983 215 aaKnown RBP20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 MRPL17Q9NRX2 175 aaKnown RBP20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 SSX2IPQ9Y2D8 614 aa20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 STYXL1Q9Y6J8 313 aa20.12■□□□□ 0.81
PRPF40B-216ENST00000552301 C2orf71A6NGG8 1288 aa20.11■□□□□ 0.81
PRPF40B-216ENST00000552301 HIDE1A8MVS5 230 aa20.11■□□□□ 0.81
PRPF40B-216ENST00000552301 F8W810 466 aa20.11■□□□□ 0.81
PRPF40B-216ENST00000552301 PER2O15055 1255 aa20.11■□□□□ 0.81
PRPF40B-216ENST00000552301 KIF4AO95239 1232 aa20.11■□□□□ 0.81
PRPF40B-216ENST00000552301 GTF2F1P35269 517 aaKnown RBP eCLIP20.11■□□□□ 0.812e-15■■■■■ 55.4
PRPF40B-216ENST00000552301 GLUD2P49448 558 aa20.11■□□□□ 0.81
PRPF40B-216ENST00000552301 ACOT2P49753 483 aa20.11■□□□□ 0.81
PRPF40B-216ENST00000552301 TFF2Q03403 129 aa20.11■□□□□ 0.81
PRPF40B-216ENST00000552301 ELAVL2Q12926 359 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms