RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SPATA33Q96N06 139 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 ANKFY1Q9P2R3 1169 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 PTPRJQ12913 1337 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 SCN4AP35499 1836 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 IGKV6-21A0A0C4DH24 114 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 MTA2O94776 668 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 VNN1O95497 513 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 PIK3CAP42336 1068 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 AARSP49588 968 aaKnown RBP eCLIP15.07■□□□□ 0
RAB3IP-216ENST00000552199 EPHB4P54760 987 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 LAMTOR4Q0VGL1 99 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 KLHL7Q8IXQ5 586 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 GDAP1L1Q96MZ0 367 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 CGRRF1Q99675 332 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 CCDC113Q9H0I3 377 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 EPB41L5Q9HCM4 733 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 PNMA3Q9UL41 463 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 TTC7AQ9ULT0 858 aaPredicted RBP15.07■□□□□ 0
RAB3IP-216ENST00000552199 ALG6Q9Y672 507 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 CNTNAP2Q9UHC6 1331 aa15.07■□□□□ 0
RAB3IP-216ENST00000552199 ASB14A6NK59 587 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 RAD51CO43502 376 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 GRIN3BO60391 1043 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 MSCO60682 206 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 CYP1A2P05177 515 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 TXNP10599 105 aaKnown RBP15.06■□□□□ 0
RAB3IP-216ENST00000552199 CYP2C8P10632 490 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 KRT5P13647 590 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 GUCY2DQ02846 1103 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 BIRC3Q13489 604 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 MXD4Q14582 209 aaPredicted RBP15.06■□□□□ 0
RAB3IP-216ENST00000552199 CDCA2Q69YH5 1023 aaPredicted RBP15.06■□□□□ 0
RAB3IP-216ENST00000552199 EMBQ6PCB8 327 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 SND1Q7KZF4 910 aaKnown RBP eCLIP15.06■□□□□ 0
RAB3IP-216ENST00000552199 GTF3C2Q8WUA4 911 aaPredicted RBP15.06■□□□□ 0
RAB3IP-216ENST00000552199 COPS5Q92905 334 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 MRPL4Q9BYD3 311 aaKnown RBP15.06■□□□□ 0
RAB3IP-216ENST00000552199 EFCC1Q9HA90 598 aa15.06■□□□□ 0
RAB3IP-216ENST00000552199 ZC3H4Q9UPT8 1303 aaKnown RBP15.06■□□□□ 0
RAB3IP-216ENST00000552199 TTLL13PA6NNM8 815 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 CCDC188H7C350 402 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 KRIT1O00522 736 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 CLDN3O15551 220 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 SLC26A2P50443 739 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 TTLL4Q14679 1199 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 TMEM63BQ5T3F8 832 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 ACAD10Q6JQN1 1059 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 CAVIN3Q969G5 261 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 CCDC102AQ96A19 550 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 JPH2Q9BR39 696 aaPredicted RBP15.05■□□□□ 0
RAB3IP-216ENST00000552199 AP1M1Q9BXS5 423 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 CARD9Q9H257 536 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 SMARCAD1Q9H4L7 1026 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 MED4Q9NPJ6 270 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 PDGFCQ9NRA1 345 aa15.05■□□□□ 0
RAB3IP-216ENST00000552199 IQCA1LA6NCM1 817 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 SRGAP2CP0DJJ0 459 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 CLEC16AQ2KHT3 1053 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 HSP90B2PQ58FF3 399 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 DCAF12L1Q5VU92 463 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 ZBTB8OSQ8IWT0 167 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 LRRC71Q8N4P6 559 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 GPRC5AQ8NFJ5 357 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 FAM71BQ8TC56 605 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 UBE2Q2Q8WVN8 375 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 RPS6KC1Q96S38 1066 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 ACO2Q99798 780 aaKnown RBP15.05■□□□□ -0
RAB3IP-216ENST00000552199 GTF3C4Q9UKN8 822 aa15.05■□□□□ -0
RAB3IP-216ENST00000552199 ZSCAN5CA6NGD5 496 aaPredicted RBP15.04■□□□□ -0
RAB3IP-216ENST00000552199 UNCXA6NJT0 531 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 MIF4GDA9UHW6 222 aaKnown RBP15.04■□□□□ -0
RAB3IP-216ENST00000552199 TOM1L1O75674 476 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 PRKCBP05771 671 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 HARSP12081 509 aaKnown RBP15.04■□□□□ -0
RAB3IP-216ENST00000552199 CARSP49589 748 aaKnown RBP15.04■□□□□ -0
RAB3IP-216ENST00000552199 BPIFB4P59827 614 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 PAK2Q13177 524 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 NNTQ13423 1086 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 SEZ6Q53EL9 994 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 SPOPLQ6IQ16 392 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 PNMA8AQ86V59 439 aaPredicted RBP15.04■□□□□ -0
RAB3IP-216ENST00000552199 ZNF677Q86XU0 584 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 BRSK2Q8IWQ3 736 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 RNF149Q8NC42 400 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 OR5B17Q8NGF7 314 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 CASKIN2Q8WXE0 1202 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 ZBTB9Q96C00 473 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 ZNF653Q96CK0 615 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 C2orf40Q9H1Z8 148 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 PLEKHA4Q9H4M7 779 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 PCDHB2Q9Y5E7 798 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 SART1O43290 800 aaKnown RBP15.04■□□□□ -0
RAB3IP-216ENST00000552199 ATMINO43313 823 aaPredicted RBP15.04■□□□□ -0
RAB3IP-216ENST00000552199 FAM189A1O60320 539 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 HBP1O60381 514 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 ITGA4P13612 1032 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 ACO1P21399 889 aaKnown RBP15.04■□□□□ -0
RAB3IP-216ENST00000552199 CCNA1P78396 465 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 GRM1Q13255 1194 aa15.04■□□□□ -0
RAB3IP-216ENST00000552199 CUL2Q13617 745 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms