RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 NEDD9Q14511 834 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 USH1GQ495M9 461 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 PREPLQ4J6C6 727 aaPredicted RBP5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CBWD6Q4V339 395 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CBWD3Q5JTY5 395 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 SPDYAQ5MJ70 313 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CBWD5Q5RIA9 395 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 RNF187Q5TA31 235 aaPredicted RBP5.76□□□□□ -1.49
CCNT1-204ENST00000551989 DCAF12L1Q5VU92 463 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 KRT39Q6A163 491 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CCDC137Q6PK04 289 aaKnown RBP5.76□□□□□ -1.49
CCNT1-204ENST00000551989 ZDHHC24Q6UX98 284 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 MIER3Q7Z3K6 550 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 PIGWQ7Z7B1 504 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 AMIGO3Q86WK7 504 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 SLC13A5Q86YT5 568 aaPredicted RBP5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CLEC10AQ8IUN9 316 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 SIAH1Q8IUQ4 282 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 TPH2Q8IWU9 490 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 SCUBE3Q8IX30 993 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 C4orf19Q8IY42 314 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 FAM71AQ8IYT1 594 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 LARGE2Q8N3Y3 721 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CFAP61Q8NHU2 1237 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 ZNF564Q8TBZ8 553 aaPredicted RBP5.76□□□□□ -1.49
CCNT1-204ENST00000551989 EPS8L1Q8TE68 723 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 FAM151AQ8WW52 585 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 SPIRE2Q8WWL2 714 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CCT6BQ92526 530 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 SHC3Q92529 594 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 KAT2BQ92831 832 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CD101Q93033 1021 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CNKSR1Q969H4 720 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 VCPIP1Q96JH7 1222 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 IFT74Q96LB3 600 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 NT5C1BQ96P26 610 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 ZNF317Q96PQ6 595 aaPredicted RBP5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CCDC77Q9BR77 488 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 MXRA8Q9BRK3 442 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 LXNQ9BS40 222 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 WDR18Q9BV38 432 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 THAP2Q9H0W7 228 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 VPS33BQ9H267 617 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 DPH5Q9H2P9 285 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 CENPHQ9H3R5 247 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 TMEM8AQ9HCN3 771 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 OSGEPQ9NPF4 335 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 UBN1Q9NPG3 1134 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 INTS9Q9NV88 658 aaKnown RBP5.76□□□□□ -1.49
CCNT1-204ENST00000551989 GRHL1Q9NZI5 618 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 PKD2L1Q9P0L9 805 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 SENP1Q9P0U3 644 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 AJAP1Q9UKB5 411 aaPredicted RBP5.76□□□□□ -1.49
CCNT1-204ENST00000551989 PPP1R9AQ9ULJ8 1098 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 TNS1Q9HBL0 1735 aaKnown RBP5.76□□□□□ -1.49
CCNT1-204ENST00000551989 COL11A1P12107 1806 aaPredicted RBP5.76□□□□□ -1.49
CCNT1-204ENST00000551989 PHIPQ8WWQ0 1821 aa5.76□□□□□ -1.49
CCNT1-204ENST00000551989 AFF2P51816 1311 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 ADGRA3Q8IWK6 1321 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 IPO5O00410 1097 aaKnown RBP5.75□□□□□ -1.49
CCNT1-204ENST00000551989 MAFGO15525 162 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 RIPK2O43353 540 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 PSTPIP1O43586 416 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 SPOPO43791 374 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 ECE2O60344 883 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 SORBS3O60504 671 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 ATP5HO75947 161 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 SUN1O94901 812 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 CFBP00751 764 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 GH2P01242 217 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 FTLP02792 175 aaPredicted RBP5.75□□□□□ -1.49
CCNT1-204ENST00000551989 ICAM1P05362 532 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 ITGA4P13612 1032 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 CHN1P15882 459 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 ABCB4P21439 1286 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 GARTP22102 1010 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 SCTRP47872 440 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 QARSP47897 775 aaKnown RBP5.75□□□□□ -1.49
CCNT1-204ENST00000551989 RARRES1P49788 294 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 SCNN1DP51172 638 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 CYP2J2P51589 502 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 SEC24CP53992 1094 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 SLC18A1P54219 525 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 RNASE9P60153 205 aaKnown RBP5.75□□□□□ -1.49
CCNT1-204ENST00000551989 MRPS25P82663 173 aaKnown RBP5.75□□□□□ -1.49
CCNT1-204ENST00000551989 CCDC15Q0P6D6 951 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 ACVR2BQ13705 512 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 RASA2Q15283 850 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 ZNF568Q3ZCX4 644 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 WLSQ5T9L3 541 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 PCNX4Q63HM2 1172 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 MSL1Q68DK7 614 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 ACAD10Q6JQN1 1059 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 PHLDB3Q6NSJ2 640 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 CCDC174Q6PII3 467 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 KCNV1Q6PIU1 500 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 PPP1R21Q6ZMI0 780 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.75□□□□□ -1.49
CCNT1-204ENST00000551989 ARHGEF18Q6ZSZ5 1173 aa5.75□□□□□ -1.49
CCNT1-204ENST00000551989 MIGA2Q7L4E1 593 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms