RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 DNMT3BQ9UBC3 853 aaKnown RBP23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 TPCN1Q9ULQ1 816 aa23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 POLIQ9UNA4 740 aa23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 USP20Q9Y2K6 914 aa23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 LRRIQ4A6NIV6 560 aa23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 FAM170BA6NMN3 283 aa23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 XRCC6P12956 609 aaKnown RBP eCLIP23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 CD72P21854 359 aa23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 PRKCQQ04759 706 aa23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 ZNF528Q3MIS6 628 aa23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 POTEHQ6S545 545 aa23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 PDZD7Q9H5P4 517 aa23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 PRMT7Q9NVM4 692 aaPredicted RBP23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 SPATA6Q9NWH7 488 aaPredicted RBP23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 OTOGLQ3ZCN5 2332 aa23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 NOTCH4Q99466 2003 aa23.96■■□□□ 1.43
SMARCD1-212ENST00000551966 USO1O60763 962 aaKnown RBP23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 PFKFB2O60825 505 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 THP07101 528 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 SPATA31C1P0DKV0 1188 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 FDPSP14324 419 aaKnown RBP23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 TXKP42681 527 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 RAB33AQ14088 237 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 CALCRLQ16602 461 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 FAM187BQ17R55 369 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 AXDND1Q5T1B0 1012 aaPredicted RBP23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 RSPO2Q6UXX9 243 aaPredicted RBP23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 MTSS1LQ765P7 747 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 SLC7A14Q8TBB6 771 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 PRIMPOLQ96LW4 560 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 KXD1Q9BQD3 176 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 BCO2Q9BYV7 579 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 OSBPL6Q9BZF3 934 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 FBXO4Q9UKT5 387 aa23.95■■□□□ 1.42
SMARCD1-212ENST00000551966 KINO60870 393 aaKnown RBP23.94■■□□□ 1.42
SMARCD1-212ENST00000551966 OR1D2P34982 312 aa23.94■■□□□ 1.42
SMARCD1-212ENST00000551966 UBXN2BQ14CS0 331 aa23.94■■□□□ 1.42
SMARCD1-212ENST00000551966 UVSSAQ2YD98 709 aa23.94■■□□□ 1.42
SMARCD1-212ENST00000551966 CDCA2Q69YH5 1023 aaPredicted RBP23.94■■□□□ 1.42
SMARCD1-212ENST00000551966 NOSTRINQ8IVI9 506 aa23.94■■□□□ 1.42
SMARCD1-212ENST00000551966 MTMR9Q96QG7 549 aa23.94■■□□□ 1.42
SMARCD1-212ENST00000551966 LTB4R2Q9NPC1 389 aa23.94■■□□□ 1.42
SMARCD1-212ENST00000551966 ORC3Q9UBD5 711 aaPredicted RBP23.94■■□□□ 1.42
SMARCD1-212ENST00000551966 VWA8A3KMH1 1905 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 MIA3Q5JRA6 1907 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 LAMTOR5O43504 91 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 XYLBO75191 536 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 RECQL4O94761 1208 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 EDN1P05305 212 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 FGFR3P22607 806 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 KRT2P35908 639 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 CSTF1Q05048 431 aaKnown RBP23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 RSPO4Q2I0M5 234 aaPredicted RBP23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 CD300LGQ6UXG3 332 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 NPAS3Q8IXF0 933 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 BSNDQ8WZ55 320 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 CCDC43Q96MW1 224 aaKnown RBP23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 PLA2G2FQ9BZM2 168 aa23.93■■□□□ 1.42
SMARCD1-212ENST00000551966 SHISA7A6NL88 538 aa23.92■■□□□ 1.42
SMARCD1-212ENST00000551966 POU2F2P09086 479 aa23.92■■□□□ 1.42
SMARCD1-212ENST00000551966 FZD5Q13467 585 aa23.92■■□□□ 1.42
SMARCD1-212ENST00000551966 VARS2Q5ST30 1063 aaKnown RBP23.92■■□□□ 1.42
SMARCD1-212ENST00000551966 N4BP3O15049 544 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 PFKPQ01813 784 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 ELAVL2Q12926 359 aaKnown RBP23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 PABPC1LQ4VXU2 614 aaKnown RBP23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 EEF1DP3Q658K8 133 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 PDXDC1Q6P996 788 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 CATSPER3Q86XQ3 398 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 ZBTB44Q8NCP5 570 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 ING5Q8WYH8 240 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 NELL1Q92832 810 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 CLDN23Q96B33 292 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 BORCS6Q96GS4 357 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 MTRRQ9UBK8 725 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 KCNH3Q9ULD8 1083 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 PATJQ8NI35 1801 aa23.91■■□□□ 1.42
SMARCD1-212ENST00000551966 BTBD18B2RXH4 712 aa23.9■■□□□ 1.42
SMARCD1-212ENST00000551966 ATP2B1P20020 1258 aa23.9■■□□□ 1.42
SMARCD1-212ENST00000551966 TARSP26639 723 aaKnown RBP23.9■■□□□ 1.42
SMARCD1-212ENST00000551966 PRPF4BQ13523 1007 aaKnown RBP23.9■■□□□ 1.42
SMARCD1-212ENST00000551966 ZBTB8OSQ8IWT0 167 aa23.9■■□□□ 1.42
SMARCD1-212ENST00000551966 MCRS1Q96EZ8 462 aa23.9■■□□□ 1.42
SMARCD1-212ENST00000551966 CCDC113Q9H0I3 377 aa23.9■■□□□ 1.42
SMARCD1-212ENST00000551966 TMEM60Q9H2L4 133 aa23.9■■□□□ 1.42
SMARCD1-212ENST00000551966 PCDHGA2Q9Y5H1 932 aa23.9■■□□□ 1.42
SMARCD1-212ENST00000551966 CDY1Q9Y6F8 540 aa23.9■■□□□ 1.42
SMARCD1-212ENST00000551966 ACKR2O00590 384 aa23.89■■□□□ 1.41
SMARCD1-212ENST00000551966 SPTLC1O15269 473 aa23.89■■□□□ 1.41
SMARCD1-212ENST00000551966 MED24O75448 989 aa23.89■■□□□ 1.41
SMARCD1-212ENST00000551966 SLC5A9Q2M3M2 681 aa23.89■■□□□ 1.41
SMARCD1-212ENST00000551966 ZBTB41Q5SVQ8 909 aa23.89■■□□□ 1.41
SMARCD1-212ENST00000551966 MCPH1Q8NEM0 835 aa23.89■■□□□ 1.41
SMARCD1-212ENST00000551966 ATRIPQ8WXE1 791 aa23.89■■□□□ 1.41
SMARCD1-212ENST00000551966 WASF1Q92558 559 aa23.89■■□□□ 1.41
SMARCD1-212ENST00000551966 GDAQ9Y2T3 454 aa23.89■■□□□ 1.41
SMARCD1-212ENST00000551966 GPR179Q6PRD1 2367 aa23.88■■□□□ 1.41
SMARCD1-212ENST00000551966 TMEM189-UBE2V1I3L0A0 370 aa23.88■■□□□ 1.41
SMARCD1-212ENST00000551966 NEMFO60524 1076 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms