RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 DGKIO75912 1065 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 IL18BPO95998 194 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 HMOX1P09601 288 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 CETPP11597 493 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 PSMC4P43686 418 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 NASPP49321 788 aaPredicted RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 MRE11P49959 708 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 RPS8P62241 208 aaKnown RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 SLC25A3Q00325 362 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 TOP3AQ13472 1001 aaPredicted RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 NFYCQ13952 458 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 RRP1BQ14684 758 aaKnown RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 CCL15Q16663 113 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 MAP3K21Q5TCX8 1036 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 E4F1Q66K89 784 aaPredicted RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 KIF6Q6ZMV9 814 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 ANKRD23Q86SG2 305 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 CCDC103Q8IW40 242 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 CRACR2BQ8N4Y2 399 aaPredicted RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 C19orf47Q8N9M1 422 aaKnown RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 USP38Q8NB14 1042 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3□□□□□ -1.93
PTCH1-223ENST00000551623 RAET1EQ8TD07 263 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 DIS3LQ8TF46 1054 aaKnown RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 CELF1Q92879 486 aaKnown RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 MRGPRX3Q96LB0 322 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 DEFB118Q96PH6 123 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 NRDE2Q9H7Z3 1164 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 PHAXQ9H814 394 aaKnown RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 KIAA1522Q9P206 1035 aaPredicted RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 HECAQ9UBI9 543 aaPredicted RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 PUF60Q9UHX1 559 aaKnown RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 EMC9Q9Y3B6 208 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 PKD1L2Q7Z442 2459 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 ZSWIM8A7E2V4 1837 aa3□□□□□ -1.93
PTCH1-223ENST00000551623 RPAP1Q9BWH6 1393 aaPredicted RBP3□□□□□ -1.93
PTCH1-223ENST00000551623 EPG5Q9HCE0 2579 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 BTBD19C9JJ37 291 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 ADCY3O60266 1144 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 DIAPH1O60610 1272 aaKnown RBP2.99□□□□□ -1.93
PTCH1-223ENST00000551623 UFL1O94874 794 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 FOSL2P15408 326 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 PTGS2P35354 604 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 EIF4A1P60842 406 aaKnown RBP2.99□□□□□ -1.93
PTCH1-223ENST00000551623 FKBP1AP62942 108 aaKnown RBP2.99□□□□□ -1.93
PTCH1-223ENST00000551623 MRPS5P82675 430 aaKnown RBP2.99□□□□□ -1.93
PTCH1-223ENST00000551623 PRKCZQ05513 592 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 GRIN1Q05586 938 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 SNAPC2Q13487 334 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 MOGSQ13724 837 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 VGLL4Q14135 290 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 PCOLCEQ15113 449 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 TBR1Q16650 682 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 HSP90AB3PQ58FF7 597 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 GTF2IRD2BQ6EKJ0 949 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 KIAA1211LQ6NV74 962 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 POMZP3Q6PJE2 187 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 MICALCLQ6ZW33 695 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 MRGPREQ86SM8 312 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 ADGRE4PQ86SQ3 457 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 GTF2IRD2Q86UP8 949 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 ERO1BQ86YB8 467 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 TRIM48Q8IWZ4 208 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 D2HGDHQ8N465 521 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 CFHR4Q92496 578 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 GPRASP2Q96D09 838 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 SCYL1Q96KG9 808 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 UHRF1Q96T88 793 aaPredicted RBP2.99□□□□□ -1.93
PTCH1-223ENST00000551623 TACO1Q9BSH4 297 aaKnown RBP2.99□□□□□ -1.93
PTCH1-223ENST00000551623 COA1Q9GZY4 146 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.99□□□□□ -1.93
PTCH1-223ENST00000551623 EPB41L1Q9H4G0 881 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 C11orf49Q9H6J7 331 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 CYP26B1Q9NR63 512 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 THEGQ9P2T0 379 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 PACSIN3Q9UKS6 424 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 ZMYND8Q9ULU4 1186 aaPredicted RBP2.99□□□□□ -1.93
PTCH1-223ENST00000551623 FZD1Q9UP38 647 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 SCAF8Q9UPN6 1271 aaKnown RBP2.99□□□□□ -1.93
PTCH1-223ENST00000551623 KMT2BQ9UMN6 2715 aaPredicted RBP2.99□□□□□ -1.93
PTCH1-223ENST00000551623 CHD9Q3L8U1 2897 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 MAST2Q6P0Q8 1798 aa2.99□□□□□ -1.93
PTCH1-223ENST00000551623 B2RBV5 119 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 ONECUT2O95948 504 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 TFRCP02786 760 aaKnown RBP2.98□□□□□ -1.93
PTCH1-223ENST00000551623 HMGCRP04035 888 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 CAPNS1P04632 268 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 ENO2P09104 434 aaPredicted RBP2.98□□□□□ -1.93
PTCH1-223ENST00000551623 FAHP16930 419 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 VAMP1P23763 118 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 FLT3LGP49771 235 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 CASP7P55210 303 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 PFKPQ01813 784 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 KCNAB2Q13303 367 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 PPIL2Q13356 520 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 LSAMPQ13449 338 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 TNFAIP1Q13829 316 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 PRKG1Q13976 671 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 GRM7Q14831 915 aa2.98□□□□□ -1.93
PTCH1-223ENST00000551623 TAF7Q15545 349 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms