RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	GRM2	Q14416	872 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	UAP1L1	Q3KQV9	507 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	GPATCH4	Q5T3I0	446 aa	Known RBP	6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	DAB2IP	Q5VWQ8	1189 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	TSHZ3	Q63HK5	1081 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260		Q6ZS52	159 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	WDR5B	Q86VZ2	330 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ZNF843	Q8N446	348 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	KBTBD3	Q8NAB2	608 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	PLPP7	Q8NBV4	271 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	MDM1	Q8TC05	714 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	FAM3C	Q92520	227 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	LOXL4	Q96JB6	756 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	B3GALT6	Q96L58	329 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	RPS6KC1	Q96S38	1066 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	MRPL9	Q9BYD2	267 aa	Known RBP	6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	RAB6B	Q9NRW1	208 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	VPS45	Q9NRW7	570 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	TBC1D13	Q9NVG8	400 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ANKRD17	O75179	2603 aa	Known RBP	6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260	FRMPD4	Q14CM0	1322 aa		6.76	□□□□□ -1.33
RACGAP1-223	ENST00000551260		B4E1Z4	1266 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	GCOM1	H8Y6P7	765 aa	Predicted RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	CDX4	O14627	284 aa	Predicted RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	IPO8	O15397	1037 aa	Known RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	TGM5	O43548	720 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	GAS2	O43903	313 aa	Known RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	SMARCA5	O60264	1052 aa	Predicted RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	DDHD2	O94830	711 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	PAPLN	O95428	1278 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	STAU1	O95793	577 aa	Known RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	IL2RA	P01589	272 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	POLR2M	P0CAP2	368 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	RPL17	P18621	184 aa	Known RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	GPC1	P35052	558 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	AFF1	P51825	1210 aa	Known RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	CRYBB1	P53674	252 aa	Predicted RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	USP4	Q13107	963 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	MAP7D1	Q3KQU3	841 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	OXLD1	Q5BKU9	147 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ODR4	Q5SWX8	454 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	VPS53	Q5VIR6	699 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	LYSMD3	Q7Z3D4	306 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	CACNA2D4	Q7Z3S7	1137 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	SPEM1	Q8N4L4	309 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	GAB3	Q8WWW8	586 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	IRF7	Q92985	503 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	UBL7	Q96S82	380 aa	Predicted RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	SENP7	Q9BQF6	1050 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	AMN	Q9BXJ7	453 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	JADE2	Q9NQC1	790 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	TCP11L1	Q9NUJ3	509 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ANAPC4	Q9UJX5	808 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	HRH3	Q9Y5N1	445 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ARID2	Q68CP9	1835 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	PTPRQ	Q9UMZ3	2332 aa		6.75	□□□□□ -1.33
RACGAP1-223	ENST00000551260	DOPEY1	Q5JWR5	2465 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	MYLK	Q15746	1914 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	MYO9A	B2RTY4	2548 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	UTP20	O75691	2785 aa	Known RBP	6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260		A0A0U1RQF3	1178 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	FAM221B	A6H8Z2	402 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	PATE3	B3GLJ2	98 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260		F8W810	466 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	CCL16	O15467	120 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	CSDE1	O75534	798 aa	Known RBP	6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	RPP40	O75818	363 aa	Known RBP	6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	UROD	P06132	367 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	FGR	P09769	529 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	CT47B1	P0C2W7	299 aa	Predicted RBP	6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	CCDC192	P0DO97	292 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	RLBP1	P12271	317 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ZSCAN20	P17040	1043 aa	Predicted RBP	6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	CCNE1	P24864	410 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	GMPR	P36959	345 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	FAM193A	P78312	1265 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	SIM1	P81133	766 aa	Predicted RBP	6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	RNASEL	Q05823	741 aa	Known RBP	6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	HSP90AB4P	Q58FF6	505 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	TANGO2	Q6ICL3	276 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	PRICKLE2	Q7Z3G6	844 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ITPRIP	Q8IWB1	547 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	STAG2	Q8N3U4	1231 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	MCRS1	Q96EZ8	462 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	HERC2P3	Q9BVR0	1158 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	GRIP2	Q9C0E4	1043 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	CLMP	Q9H6B4	373 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	CCDC86	Q9H6F5	360 aa	Known RBP	6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	TMEM9B	Q9NQ34	198 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	HCFC1R1	Q9NWW0	138 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ZDHHC7	Q9NXF8	308 aa		6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	MAP3K20	Q9NYL2	800 aa	Known RBP	6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	NUP210	Q8TEM1	1887 aa	Predicted RBP	6.74	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ZBTB42	B2RXF5	422 aa		6.73	□□□□□ -1.33
RACGAP1-223	ENST00000551260	MAN2B1	O00754	1011 aa		6.73	□□□□□ -1.33
RACGAP1-223	ENST00000551260	ATXN7	O15265	892 aa	Predicted RBP	6.73	□□□□□ -1.33
RACGAP1-223	ENST00000551260	OFD1	O75665	1012 aa		6.73	□□□□□ -1.33
RACGAP1-223	ENST00000551260	STAM2	O75886	525 aa		6.73	□□□□□ -1.33
RACGAP1-223	ENST00000551260	KRT38	O76015	456 aa		6.73	□□□□□ -1.33

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