RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 PTPRHQ9HD43 1115 aa21.88■■□□□ 1.09
GCN1-207ENST00000550471 GDAQ9Y2T3 454 aa21.88■■□□□ 1.09
GCN1-207ENST00000550471 TTLL13PA6NNM8 815 aa21.87■■□□□ 1.09
GCN1-207ENST00000550471 C2CD4DB7Z1M9 353 aa21.87■■□□□ 1.09
GCN1-207ENST00000550471 PLA2G4BP0C869 781 aa21.87■■□□□ 1.09
GCN1-207ENST00000550471 NUBP1P53384 320 aa21.87■■□□□ 1.09
GCN1-207ENST00000550471 MAPK7Q13164 816 aa21.87■■□□□ 1.09
GCN1-207ENST00000550471 TMEM119Q4V9L6 283 aa21.87■■□□□ 1.09
GCN1-207ENST00000550471 MPZL3Q6UWV2 235 aa21.87■■□□□ 1.09
GCN1-207ENST00000550471 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.87■■□□□ 1.09
GCN1-207ENST00000550471 HFE2Q6ZVN8 426 aa21.87■■□□□ 1.09
GCN1-207ENST00000550471 INTS4Q96HW7 963 aaKnown RBP21.87■■□□□ 1.09
GCN1-207ENST00000550471 ACAP3Q96P50 834 aa21.87■■□□□ 1.09
GCN1-207ENST00000550471 PNMA5Q96PV4 448 aa21.87■■□□□ 1.09
GCN1-207ENST00000550471 CASTOR2A6NHX0 329 aa21.86■■□□□ 1.09
GCN1-207ENST00000550471 TOM1L1O75674 476 aa21.86■■□□□ 1.09
GCN1-207ENST00000550471 PROZP22891 400 aa21.86■■□□□ 1.09
GCN1-207ENST00000550471 SLC12A3P55017 1021 aa21.86■■□□□ 1.09
GCN1-207ENST00000550471 NAB2Q15742 525 aa21.86■■□□□ 1.09
GCN1-207ENST00000550471 XKR4Q5GH76 650 aa21.86■■□□□ 1.09
GCN1-207ENST00000550471 KCNK18Q7Z418 384 aa21.86■■□□□ 1.09
GCN1-207ENST00000550471 PPP1R10Q96QC0 940 aaKnown RBP21.86■■□□□ 1.09
GCN1-207ENST00000550471 TSPAN18Q96SJ8 248 aa21.86■■□□□ 1.09
GCN1-207ENST00000550471 CCDC195A0A1B0GUA6 201 aa21.85■■□□□ 1.09
GCN1-207ENST00000550471 FAM171A1Q5VUB5 890 aa21.85■■□□□ 1.09
GCN1-207ENST00000550471 LILRA6Q6PI73 481 aa21.85■■□□□ 1.09
GCN1-207ENST00000550471 FBXL6Q8N531 539 aa21.85■■□□□ 1.09
GCN1-207ENST00000550471 KREMEN2Q8NCW0 462 aa21.85■■□□□ 1.09
GCN1-207ENST00000550471 RASSF8Q8NHQ8 419 aa21.85■■□□□ 1.09
GCN1-207ENST00000550471 NXPE3Q969Y0 559 aa21.85■■□□□ 1.09
GCN1-207ENST00000550471 CDT1Q9H211 546 aa21.85■■□□□ 1.09
GCN1-207ENST00000550471 WDR6Q9NNW5 1121 aaKnown RBP21.85■■□□□ 1.09
GCN1-207ENST00000550471 IGSF9Q9P2J2 1179 aa21.85■■□□□ 1.09
GCN1-207ENST00000550471 RAPGEFL1Q9UHV5 662 aa21.85■■□□□ 1.09
GCN1-207ENST00000550471 SMIM28A0A1B0GU29 152 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 SLC16A4O15374 487 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 B3GAT3O94766 335 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 KIF4AO95239 1232 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 EDN1P05305 212 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 HNRNPA1P09651 372 aaKnown RBP eCLIP21.84■■□□□ 1.09
GCN1-207ENST00000550471 PDIA4P13667 645 aaKnown RBP21.84■■□□□ 1.09
GCN1-207ENST00000550471 KCNE1P15382 129 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 HOXA9P31269 272 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 RPL9P32969 192 aaKnown RBP21.84■■□□□ 1.09
GCN1-207ENST00000550471 PSMD5Q16401 504 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 ALKAL1Q6UXT8 129 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 TMEM161BQ8NDZ6 487 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 TARS2Q9BW92 718 aaKnown RBP21.84■■□□□ 1.09
GCN1-207ENST00000550471 IRF2BPLQ9H1B7 796 aa21.84■■□□□ 1.09
GCN1-207ENST00000550471 ZFP37Q9Y6Q3 630 aaPredicted RBP21.84■■□□□ 1.09
GCN1-207ENST00000550471 TECTAO75443 2155 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 TGM5O43548 720 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 NOLC1Q14978 699 aaKnown RBP eCLIP21.83■■□□□ 1.09
GCN1-207ENST00000550471 UPP1Q16831 310 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 UVSSAQ2YD98 709 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 LIN9Q5TKA1 542 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 ANKS3Q6ZW76 656 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 SMG7Q92540 1137 aaKnown RBP21.83■■□□□ 1.09
GCN1-207ENST00000550471 PRKD2Q9BZL6 878 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 CCSER1Q9C0I3 900 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 PLEKHA5Q9HAU0 1116 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 PIDD1Q9HB75 910 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 POLD4Q9HCU8 107 aa21.83■■□□□ 1.09
GCN1-207ENST00000550471 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.83■■□□□ 1.09
GCN1-207ENST00000550471 VPS37CA5D8V6 355 aaPredicted RBP21.82■■□□□ 1.08
GCN1-207ENST00000550471 F8W810 466 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 CLDN3O15551 220 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 ZMYND10O75800 440 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 POU2F2P09086 479 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 WEE2P0C1S8 567 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 MAPTP10636 758 aaKnown RBP21.82■■□□□ 1.08
GCN1-207ENST00000550471 FGFR3P22607 806 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 NCKAP1LP55160 1127 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 SF3A1Q15459 793 aaKnown RBP21.82■■□□□ 1.08
GCN1-207ENST00000550471 RTP2Q5QGT7 225 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 TAS1R3Q7RTX0 852 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 CEP57Q86XR8 500 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 PALB2Q86YC2 1186 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 LNX1Q8TBB1 728 aaPredicted RBP21.82■■□□□ 1.08
GCN1-207ENST00000550471 SNX27Q96L92 541 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 PARVGQ9HBI0 331 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 CNTN3Q9P232 1028 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 CCDC39Q9UFE4 941 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 BACE2Q9Y5Z0 518 aa21.82■■□□□ 1.08
GCN1-207ENST00000550471 MORC2Q9Y6X9 1032 aaPredicted RBP21.82■■□□□ 1.08
GCN1-207ENST00000550471 CLUHO75153 1309 aa21.81■■□□□ 1.08
GCN1-207ENST00000550471 SP100P23497 879 aaPredicted RBP21.81■■□□□ 1.08
GCN1-207ENST00000550471 TXLNAP40222 546 aa21.81■■□□□ 1.08
GCN1-207ENST00000550471 MCL1Q07820 350 aa21.81■■□□□ 1.08
GCN1-207ENST00000550471 ASIC4Q96FT7 647 aa21.81■■□□□ 1.08
GCN1-207ENST00000550471 PAAF1Q9BRP4 392 aa21.81■■□□□ 1.08
GCN1-207ENST00000550471 BACH2Q9BYV9 841 aa21.81■■□□□ 1.08
GCN1-207ENST00000550471 ZSCAN16Q9H4T2 348 aaPredicted RBP21.81■■□□□ 1.08
GCN1-207ENST00000550471 LIMD1Q9UGP4 676 aa21.81■■□□□ 1.08
GCN1-207ENST00000550471 FBXW11Q9UKB1 542 aa21.81■■□□□ 1.08
GCN1-207ENST00000550471 USP20Q9Y2K6 914 aa21.81■■□□□ 1.08
GCN1-207ENST00000550471 SFI1A8K8P3 1242 aa21.8■■□□□ 1.08
GCN1-207ENST00000550471 SYN3O14994 580 aa21.8■■□□□ 1.08
GCN1-207ENST00000550471 XPOTO43592 962 aaKnown RBP21.8■■□□□ 1.08
GCN1-207ENST00000550471 XYLBO75191 536 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms