RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 MAP3K21Q5TCX8 1036 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 CDC42EP5Q6NZY7 148 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 ZBTB8OSQ8IWT0 167 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 ATP11CQ8NB49 1132 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 TMEM35BQ8NCS4 154 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 GSDMBQ8TAX9 411 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 DNAJC9Q8WXX5 260 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 FAF2Q96CS3 445 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 YARSP54577 528 aaKnown RBP10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 OVGP1Q12889 678 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 PREPLQ4J6C6 727 aaPredicted RBP10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 TMEM154Q6P9G4 183 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 BTNL9Q6UXG8 535 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 CRLF3Q8IUI8 442 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 PRCCQ92733 491 aaPredicted RBP10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 CBWD1Q9BRT8 395 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 GTF3C4Q9UKN8 822 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 TRAF3IP3Q9Y228 551 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 RAD17O75943 681 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 PYGMP11217 842 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 PGM1P36871 562 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 KDSRQ06136 332 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 SMAD1Q15797 465 aaKnown RBP10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 KLHL38Q2WGJ6 581 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 NAIF1Q69YI7 327 aaPredicted RBP10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 LVRNQ6Q4G3 990 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 RMDN3Q96TC7 470 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 FGFBP2Q9BYJ0 223 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 GANQ9H2C0 597 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 SENP1Q9P0U3 644 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 DLGAP2Q9P1A6 1054 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 PRR12Q9ULL5 1215 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 MAGED2Q9UNF1 606 aaPredicted RBP10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 SMG5Q9UPR3 1016 aaKnown RBP10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 MST1RQ04912 1400 aa10.84□□□□□ -0.67
SMARCC2-209ENST00000550164 SYNJ2BP-COX16A0A087WUM0 186 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 DCDC2CA8MYV0 355 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 ALDH5A1P51649 535 aaPredicted RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 IRX1P78414 480 aaPredicted RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 GRIK5Q16478 980 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 ERMARDQ5T6L9 678 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 ATG16L1Q676U5 607 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 SYDE1Q6ZW31 735 aaPredicted RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 FAM160B2Q86V87 743 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 SCFD2Q8WU76 684 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 CDKL2Q92772 493 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 CCDC124Q96CT7 223 aaKnown RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 PGM2Q96G03 612 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 COX16Q9P0S2 106 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 FMN2Q9NZ56 1722 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 WDR64B1ANS9 1081 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 INO80B-WBP1J3KQ70 363 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 TRPA1O75762 1119 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 MYBL1P10243 752 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 DRD4P21917 467 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 SLC30A9Q6PML9 568 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 HAS1Q92839 578 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 ZNF341Q9BYN7 854 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 INO80BQ9C086 356 aaPredicted RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 KIF9Q9HAQ2 790 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 NGRNQ9NPE2 291 aaKnown RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 TAS2R14Q9NYV8 317 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 MARCOQ9UEW3 520 aaPredicted RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 PHTF1Q9UMS5 762 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 HEY1Q9Y5J3 304 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 NVLO15381 856 aaKnown RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 ZBED1O96006 694 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 MARK3P27448 753 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 SLC1A1P43005 524 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 CPA2P48052 419 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 EIF1ADQ8N9N8 165 aaKnown RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 PIP4K2CQ8TBX8 421 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 ELMO3Q96BJ8 720 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 RPS6KC1Q96S38 1066 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 POLR3CQ9BUI4 534 aaPredicted RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 RAVER2Q9HCJ3 691 aaKnown RBP10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 IP6K2Q9UHH9 426 aa10.83□□□□□ -0.68
SMARCC2-209ENST00000550164 PFDN1O60925 122 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 YWHABP31946 246 aaKnown RBP10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 NFIAQ12857 509 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 LRRC36Q1X8D7 754 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 OR6B2Q6IFH4 312 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 IRF2BP2Q7Z5L9 587 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 LDHDQ86WU2 507 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 SH3GL3Q99963 347 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 KIFC3Q9BVG8 833 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 Q9H521 79 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 CYP4F11Q9HBI6 524 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 NYAP2Q9P242 653 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 SLC9A2Q9UBY0 812 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 C15orf41Q9Y2V0 281 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 GJA3Q9Y6H8 435 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 ZBTB39O15060 712 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 TTC4O95801 387 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 ENO1P06733 434 aaKnown RBP10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 RARAP10276 462 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 P4HA1P13674 534 aa10.82□□□□□ -0.68
SMARCC2-209ENST00000550164 ACOT2P49753 483 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms