RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TTPALQ9BTX7 342 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 FZD8Q9H461 694 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 GJB4Q9NTQ9 266 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 DLL3Q9NYJ7 618 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 KLK14Q9P0G3 267 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 PARP2Q9UGN5 583 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 FBXO4Q9UKT5 387 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 NOTCH4Q99466 2003 aa10.92□□□□□ -0.66
TRAFD1-207ENST00000550051 NPTXRO95502 500 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 THP07101 528 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 MAGEA9P43362 315 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 PFKPQ01813 784 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 RAB33AQ14088 237 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 NAB2Q15742 525 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 SLC44A4Q53GD3 710 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 PPM1LQ5SGD2 360 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 FAM171A1Q5VUB5 890 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 DGLUCYQ7Z3D6 616 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 GLYCTKQ8IVS8 523 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 RABGGTAQ92696 567 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 TNFRSF25Q93038 417 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 NELL2Q99435 816 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 PAAF1Q9BRP4 392 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 FOXQ1Q9C009 403 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 TTC12Q9H892 705 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 PDRG1Q9NUG6 133 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 PRMT7Q9NVM4 692 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 KCNH3Q9ULD8 1083 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 DMXL1Q9Y485 3027 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 OTOGLQ3ZCN5 2332 aa10.91□□□□□ -0.66
TRAFD1-207ENST00000550051 MED19A0JLT2 244 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 POTEMA6NI47 508 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 PTGESO14684 152 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 PFKFB2O60825 505 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 XYLBO75191 536 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 C8AP07357 584 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 NTHL1P78549 312 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 ELAVL2Q12926 359 aaKnown RBP10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 SNW1Q13573 536 aaKnown RBP10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 LIN9Q5TKA1 542 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 CDR2LQ86X02 465 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 GPR161Q8N6U8 529 aaKnown RBP10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 ITFG1Q8TB96 612 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 WASF1Q92558 559 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 CLDN23Q96B33 292 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 MTMR9Q96QG7 549 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 BCO2Q9BYV7 579 aa10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 POLR3FQ9H1D9 316 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-207ENST00000550051 VWA8A3KMH1 1905 aa10.9□□□□□ -0.67
TRAFD1-207ENST00000550051 PATJQ8NI35 1801 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 FRYLO94915 3013 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 DNAH14Q0VDD8 3507 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 FAM170BA6NMN3 283 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 TMEM189-UBE2V1I3L0A0 370 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 ADAM12O43184 909 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 KINO60870 393 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 LRRN2O75325 713 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 KIF4AO95239 1232 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 CTDNEP1O95476 244 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 SDHBP21912 280 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 FGFR3P22607 806 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 KRT2P35908 639 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 RBM25P49756 843 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 NR5A1Q13285 461 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 MLF2Q15773 248 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 PSMD5Q16401 504 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 CALCRLQ16602 461 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 AXDND1Q5T1B0 1012 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 CDCA2Q69YH5 1023 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 CEP57Q86XR8 500 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 DCLK2Q8N568 766 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 MCPH1Q8NEM0 835 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 ST13P5Q8NFI4 369 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 PIGOQ8TEQ8 1089 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 NELL1Q92832 810 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 AVENQ9NQS1 362 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 ORC3Q9UBD5 711 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 CACNG4Q9UBN1 327 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 MTF2Q9Y483 593 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 PCDHGA2Q9Y5H1 932 aa10.89□□□□□ -0.67
TRAFD1-207ENST00000550051 A0A087WWV3 80 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 FAM205CA6NFA0 338 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 CASTOR2A6NHX0 329 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 LRRIQ4A6NIV6 560 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 ACKR2O00590 384 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 N4BP3O15049 544 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 SPTLC1O15269 473 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 LAMTOR5O43504 91 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 FDPSP14324 419 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 OR1D2P34982 312 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 TXKP42681 527 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 RPS9P46781 194 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 MAPK6Q16659 721 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 VARS2Q5ST30 1063 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 ZBTB41Q5SVQ8 909 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 MAMSTRQ6ZN01 415 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 CATSPER3Q86XQ3 398 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 ZBTB8OSQ8IWT0 167 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms