RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 CWH43Q9H720 699 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 MIOSQ9NXC5 875 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 HSPBP1Q9NZL4 362 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 FRMD4BQ9Y2L6 1034 aa14.98□□□□□ -0.01
PTCH1-213ENST00000546820 FNDC1Q4ZHG4 1894 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-213ENST00000546820 SMIM28A0A1B0GU29 152 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 TULP1O00294 542 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-213ENST00000546820 SOX1O00570 391 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-213ENST00000546820 XPOTO43592 962 aaKnown RBP14.97□□□□□ -0.01
PTCH1-213ENST00000546820 FAM189A1O60320 539 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 EXOC3O60645 756 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 KCNE1P15382 129 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 TNFSF9P41273 254 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 CYP2J2P51589 502 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 AFF1P51825 1210 aaKnown RBP14.97□□□□□ -0.01
PTCH1-213ENST00000546820 KLHL40Q2TBA0 621 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 CENPPQ6IPU0 288 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 MLKLQ8NB16 471 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 GSTCDQ8NEC7 633 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 ZNF558Q96NG5 402 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 TMEM175Q9BSA9 504 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 NRDE2Q9H7Z3 1164 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 CNTN3Q9P232 1028 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 DACH1Q9UI36 760 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 FAN1Q9Y2M0 1017 aa14.97□□□□□ -0.01
PTCH1-213ENST00000546820 TTC26A0AVF1 554 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 BICDL2A1A5D9 508 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 GOLGA8IPA6NC78 632 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 GOLGA8JA6NMD2 632 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 LACTBL1A8MY62 500 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 ZC3H11AO75152 810 aaKnown RBP eCLIP14.96□□□□□ -0.01
PTCH1-213ENST00000546820 LETM1O95202 739 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-213ENST00000546820 NR3C1P04150 777 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 ADRB2P07550 413 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 CXCL8P10145 99 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 CCNE1P24864 410 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 CTNNB1P35222 781 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 PPM1AP35813 382 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 BCAR1P56945 870 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 KRT17Q04695 432 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 ADAM9Q13443 819 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 TUSC3Q13454 348 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 ENOX2Q16206 610 aaKnown RBP14.96□□□□□ -0.01
PTCH1-213ENST00000546820 NFIL3Q16649 462 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 EDRF1Q3B7T1 1238 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 EPC2Q52LR7 807 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 ZBTB41Q5SVQ8 909 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 SASS6Q6UVJ0 657 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 KCNT2Q6UVM3 1135 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 CRELD2Q6UXH1 353 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-213ENST00000546820 ZNF280BQ86YH2 543 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 COLGALT1Q8NBJ5 622 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 RDH13Q8NBN7 331 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 FBXO22Q8NEZ5 403 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 ARNTL2Q8WYA1 636 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 P2RX5Q93086 422 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 KIF12Q96FN5 646 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 DDX27Q96GQ7 796 aaKnown RBP14.96□□□□□ -0.01
PTCH1-213ENST00000546820 C17orf80Q9BSJ5 609 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 COLEC11Q9BWP8 271 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 SEMA6BQ9H3T3 888 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 RBAKQ9NYW8 714 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-213ENST00000546820 SPG21Q9NZD8 308 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 DERAQ9Y315 318 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 COL4A6Q14031 1691 aa14.96□□□□□ -0.01
PTCH1-213ENST00000546820 GBF1Q92538 1859 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 PPP1R3GB7ZBB8 358 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 C5orf67F2Z3F1 127 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 PTGESO14684 152 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 CETN3O15182 167 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 DDHD2O94830 711 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 GALTP07902 379 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 BMP6P22004 513 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 NR2F2P24468 414 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 OR1G1P47890 313 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 NLRP12P59046 1061 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 FKBP3Q00688 224 aaKnown RBP14.95□□□□□ -0.02
PTCH1-213ENST00000546820 LRRC63Q05C16 580 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 SNRNP35Q16560 246 aaKnown RBP14.95□□□□□ -0.02
PTCH1-213ENST00000546820 KLHL10Q6JEL2 608 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 CAVIN1Q6NZI2 390 aaKnown RBP14.95□□□□□ -0.02
PTCH1-213ENST00000546820 NT5DC4Q86YG4 428 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 COLGALT2Q8IYK4 626 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 CACTINQ8WUQ7 758 aaKnown RBP14.95□□□□□ -0.02
PTCH1-213ENST00000546820 FBXL18Q96ME1 805 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 UROC1Q96N76 676 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 PPP1R10Q96QC0 940 aaKnown RBP14.95□□□□□ -0.02
PTCH1-213ENST00000546820 C11orf84Q9BUA3 381 aaPredicted RBP14.95□□□□□ -0.02
PTCH1-213ENST00000546820 CERS4Q9HA82 394 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 DMAC2Q9NW81 257 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 STK39Q9UEW8 545 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 PUF60Q9UHX1 559 aaKnown RBP14.95□□□□□ -0.02
PTCH1-213ENST00000546820 MTUS1Q9ULD2 1270 aa14.95□□□□□ -0.02
PTCH1-213ENST00000546820 FGFR1OPO95684 399 aaKnown RBP14.94□□□□□ -0.02
PTCH1-213ENST00000546820 CYP3A5P20815 502 aa14.94□□□□□ -0.02
PTCH1-213ENST00000546820 RPL9P32969 192 aaKnown RBP14.94□□□□□ -0.02
PTCH1-213ENST00000546820 DSC1Q08554 894 aa14.94□□□□□ -0.02
PTCH1-213ENST00000546820 GPM6BQ13491 265 aa14.94□□□□□ -0.02
PTCH1-213ENST00000546820 TMEM132DQ14C87 1099 aa14.94□□□□□ -0.02
PTCH1-213ENST00000546820 CT47A1Q5JQC4 288 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms