RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 ADPGKQ9BRR6 497 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 HMG20AQ9NP66 347 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 H2AFY2Q9P0M6 372 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 TRIM10Q9UDY6 481 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 SERPINB13Q9UIV8 391 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 CCDC162PA2VCL2 907 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 RAD51CO43502 376 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 CDC40O60508 579 aaKnown RBP eCLIP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 MTRF1O75570 445 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 RGS2P41220 211 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 LGALS3BPQ08380 585 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ACAP1Q15027 740 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 NFIL3Q16649 462 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 WASHC2DQ5SRD0 308 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 MICALL2Q8IY33 904 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 SUCLG2Q96I99 432 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 HEY1Q9Y5J3 304 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 UBN2Q6ZU65 1347 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 FKBP9O95302 570 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 EIF2S1P05198 315 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 CCNHP51946 323 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 FKBP9P1Q75LS8 142 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 CYFIP1Q7L576 1253 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ZBTB8OSQ8IWT0 167 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 PLEKHG4BQ96PX9 1271 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 APOL4Q9BPW4 351 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 SHCBP1LQ9BZQ2 653 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 DMAP1Q9NPF5 467 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 RPRD1BQ9NQG5 326 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 EMILIN3Q9NT22 766 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 PCMTD2Q9NV79 361 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 TSR3Q9UJK0 312 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 PCDHA4Q9UN74 947 aa9.07□□□□□ -0.96
ATXN3-216ENST00000545170 THRAP3Q9Y2W1 955 aaKnown RBP9.07□□□□□ -0.96
ATXN3-216ENST00000545170 ZBED4O75132 1171 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 PHF2O75151 1096 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 MMP1P03956 469 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 PRR29P0C7W0 189 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 ZNF23P17027 643 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 PLCG1P19174 1290 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 OSBPP22059 807 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 LLGL2Q6P1M3 1020 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 GIPC3Q8TF64 312 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 PRCCQ92733 491 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 TEKT3Q9BXF9 490 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 HPS4Q9NQG7 708 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 CCDC59Q9P031 241 aaKnown RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 GDAQ9Y2T3 454 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 H0YCG3 227 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 WASLO00401 505 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 TSPAN4O14817 238 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 CBFA2T3O75081 653 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 ARIH2O95376 493 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 HSD17B3P37058 310 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 FBXW4P57775 412 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 ROR1Q01973 937 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 OVGP1Q12889 678 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 CHI3L2Q15782 390 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 ARL6IP4Q66PJ3 421 aaKnown RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 CENPPQ6IPU0 288 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 SPATA5Q8NB90 893 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 EZH1Q92800 747 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 MAGEB18Q96M61 343 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 RXFP1Q9HBX9 757 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 KLHL8Q9P2G9 620 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 TPST1O60507 370 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 FSBPO95073 299 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 GUCA1CO95843 209 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 H2AFXP16104 143 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 CSTF3Q12996 717 aaKnown RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 AKAP4Q5JQC9 854 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 EFHD2Q96C19 240 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 POLR1BQ9H9Y6 1135 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 PLGRKTQ9HBL7 147 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 DNAJC12Q9UKB3 198 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 NIP7Q9Y221 180 aaKnown RBP eCLIP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 FAM32AQ9Y421 112 aaKnown RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 PCDHB6Q9Y5E3 794 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 BLMP54132 1417 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 CCDC189A1A4V9 331 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 KRT87PA6NCN2 255 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 ZBTB39O15060 712 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 CDH16O75309 829 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 HSMCR30P0CW71 290 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 ITGA6P23229 1130 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 PSMB9P28065 219 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 PASD1Q8IV76 773 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 RSPH1Q8WYR4 309 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 FAM149B1Q96BN6 582 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 ROPN1BQ9BZX4 212 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 ROPN1Q9HAT0 212 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 METTL5Q9NRN9 209 aaKnown RBP9.06□□□□□ -0.96
ATXN3-216ENST00000545170 SLC52A1Q9NWF4 448 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 COPG2Q9UBF2 871 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 FKBP6O75344 327 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 RALBP11234 206 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 CDC25AP30304 524 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 KRT20P35900 424 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 ATP12AP54707 1039 aa9.06□□□□□ -0.96
ATXN3-216ENST00000545170 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms