RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 A0A0B4J269 797 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 ZNF233A6NK53 670 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 GOLGA6L6A8MZA4 724 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 ANKRD63C9JTQ0 380 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 PITPNM1O00562 1244 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 OGTO15294 1046 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 MCF2P10911 925 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 KCNA5P22460 613 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 FOXK2Q01167 660 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 MCL1Q07820 350 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 TMEM62Q0P6H9 643 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 NOLC1Q14978 699 aaKnown RBP eCLIP10.35□□□□□ -0.75
YBX3-215ENST00000544504 KRT31Q15323 416 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 ZNF568Q3ZCX4 644 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 FKBP15Q5T1M5 1219 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 PTCRAQ6ISU1 281 aaPredicted RBP10.35□□□□□ -0.75
YBX3-215ENST00000544504 NOTUMQ6P988 496 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.35□□□□□ -0.75
YBX3-215ENST00000544504 IRF2BP1Q8IU81 584 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 CREBRFQ8IUR6 639 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 HACE1Q8IYU2 909 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.35□□□□□ -0.75
YBX3-215ENST00000544504 OSMRQ99650 979 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 MSTO1Q9BUK6 570 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 CHST12Q9NRB3 414 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 TRMT13Q9NUP7 481 aaKnown RBP10.35□□□□□ -0.75
YBX3-215ENST00000544504 ANKFY1Q9P2R3 1169 aa10.35□□□□□ -0.75
YBX3-215ENST00000544504 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.35□□□□□ -0.75
YBX3-215ENST00000544504 TRIP12Q14669 1992 aaPredicted RBP10.35□□□□□ -0.75
YBX3-215ENST00000544504 A0A1B0GTH6 734 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 A0A1B0GUA9 196 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 GRXCR2A6NFK2 248 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 LGALS16A8MUM7 142 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 TSPAN1O60635 241 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 N4BP1O75113 896 aaKnown RBP10.34□□□□□ -0.75
YBX3-215ENST00000544504 RPS6KA5O75582 802 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 AKAP3O75969 853 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 BAIAP3O94812 1187 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 ATP1A3P13637 1013 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 IL9P15248 144 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 PROZP22891 400 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 CDC25BP30305 580 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 ADSSP30520 456 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 COPB1P53618 953 aaKnown RBP10.34□□□□□ -0.75
YBX3-215ENST00000544504 MGAT3Q09327 533 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 SNRNP35Q16560 246 aaKnown RBP10.34□□□□□ -0.75
YBX3-215ENST00000544504 AMHR2Q16671 573 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 TRIM71Q2Q1W2 868 aaKnown RBP10.34□□□□□ -0.75
YBX3-215ENST00000544504 SLC39A4Q6P5W5 647 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 TRIM59Q8IWR1 403 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 TMC2Q8TDI7 906 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 PPP1R13LQ8WUF5 828 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 IQCDQ96DY2 449 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 MFSD14AQ96MC6 490 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 PPP1R16BQ96T49 567 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 CBWD1Q9BRT8 395 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 MINDY3Q9H8M7 445 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 AGPAT5Q9NUQ2 364 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 IFNKQ9P0W0 207 aa10.34□□□□□ -0.75
YBX3-215ENST00000544504 PES1O00541 588 aaKnown RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 ADCY5O95622 1261 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 CHRNA1P02708 482 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 CLTAP09496 248 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 CKBP12277 381 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 SKIP12755 728 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 SELPP16109 830 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 ZSCAN20P17040 1043 aaPredicted RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 ARF4P18085 180 aaPredicted RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 GTF2H1P32780 548 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 ZNF75DP51815 510 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 AP3M2P53677 418 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 CCDC173Q0VFZ6 552 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 CETN1Q12798 172 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 BFSP1Q12934 665 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 PAK2Q13177 524 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 VWA3BQ502W6 1294 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 HSP90AA4PQ58FG1 418 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 SLC27A1Q6PCB7 646 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 SPRED2Q7Z698 418 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 CD302Q8IX05 232 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 GDPD5Q8WTR4 605 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 DHX38Q92620 1227 aaKnown RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 ZNF668Q96K58 619 aaPredicted RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 FAM213AQ9BRX8 229 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 CCDC94Q9BW85 323 aaPredicted RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 TRIM6Q9C030 488 aaPredicted RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 XPO4Q9C0E2 1151 aaKnown RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 VPS16Q9H269 839 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 NDST4Q9H3R1 872 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 PCIF1Q9H4Z3 704 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 PTPRHQ9HD43 1115 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 RTN4Q9NQC3 1192 aaKnown RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 RNF216Q9NWF9 866 aaPredicted RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 TAB2Q9NYJ8 693 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.33□□□□□ -0.76
YBX3-215ENST00000544504 CACNA1AO00555 2505 aa10.33□□□□□ -0.76
YBX3-215ENST00000544504 A0A1W2PQC6 194 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 GTPBP10A4D1E9 387 aaKnown RBP10.32□□□□□ -0.76
YBX3-215ENST00000544504 P4HA2O15460 535 aa10.32□□□□□ -0.76
YBX3-215ENST00000544504 B4GALT5O43286 388 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms