RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 EXOC1Q9NV70 894 aa11.57□□□□□ -0.56
DDX11-225ENST00000543511 NOVA2Q9UNW9 492 aaKnown RBP11.57□□□□□ -0.56
DDX11-225ENST00000543511 GRXCR1A8MXD5 290 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 EIF3DO15371 548 aaKnown RBP eCLIP11.56□□□□□ -0.56
DDX11-225ENST00000543511 ZNF623O75123 536 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 NPTXRO95502 500 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 ABCD1P33897 745 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 HOXD13P35453 343 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 RAB27AP51159 221 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 STRN3Q13033 797 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 ALCAMQ13740 583 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 BMT2Q1RMZ1 405 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 TJAP1Q5JTD0 557 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 SLC27A1Q6PCB7 646 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 ZPBP2Q6X784 338 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 MRPL10Q7Z7H8 261 aaKnown RBP11.56□□□□□ -0.56
DDX11-225ENST00000543511 HERC6Q8IVU3 1022 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 HAPLN2Q9GZV7 340 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 CDT1Q9H211 546 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 CLSTN2Q9H4D0 955 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 ELAC1Q9H777 363 aaKnown RBP11.56□□□□□ -0.56
DDX11-225ENST00000543511 SLC39A2Q9NP94 309 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 TMEM161AQ9NX61 479 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 PCDHA5Q9Y5H7 936 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 UBE4BO95155 1302 aa11.56□□□□□ -0.56
DDX11-225ENST00000543511 MEIS3P2A8K0S8 358 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 TISP43B9A030 160 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 ANKRD63C9JTQ0 380 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 LZTS3O60299 673 aaPredicted RBP11.55□□□□□ -0.56
DDX11-225ENST00000543511 PRPF6O94906 941 aaKnown RBP11.55□□□□□ -0.56
DDX11-225ENST00000543511 GJB5O95377 273 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 GATMP50440 423 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 HTRA4P83105 476 aaPredicted RBP11.55□□□□□ -0.56
DDX11-225ENST00000543511 STK4Q13043 487 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 PSMD2Q13200 908 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 DCAF4L1Q3SXM0 396 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 LRIT3Q3SXY7 679 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 ZNF568Q3ZCX4 644 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 CRTC2Q53ET0 693 aaPredicted RBP11.55□□□□□ -0.56
DDX11-225ENST00000543511 CLLU1OSQ5K130 101 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 MPZL3Q6UWV2 235 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 ZNF507Q8TCN5 953 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 SCFD1Q8WVM8 642 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 ZBTB45Q96K62 511 aaPredicted RBP11.55□□□□□ -0.56
DDX11-225ENST00000543511 GSDMAQ96QA5 445 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 ACCSQ96QU6 501 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 NXF3Q9H4D5 531 aaKnown RBP11.55□□□□□ -0.56
DDX11-225ENST00000543511 IL21Q9HBE4 155 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 GDAQ9Y2T3 454 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 IPPQ9Y573 584 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 PCDHB2Q9Y5E7 798 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 STYXL1Q9Y6J8 313 aa11.55□□□□□ -0.56
DDX11-225ENST00000543511 RANBP2P49792 3224 aaKnown RBP11.54□□□□□ -0.56
DDX11-225ENST00000543511 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.54□□□□□ -0.56
DDX11-225ENST00000543511 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.54□□□□□ -0.56
DDX11-225ENST00000543511 HNRNPDLO14979 420 aaKnown RBP11.54□□□□□ -0.56
DDX11-225ENST00000543511 FAM189A1O60320 539 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 TOM1L1O75674 476 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 DGKIO75912 1065 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 ARHGEF15O94989 841 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 MBD3O95983 291 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 STAG3L1P0CL83 205 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 FGFR1P11362 822 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 IBSPP21815 317 aaPredicted RBP11.54□□□□□ -0.56
DDX11-225ENST00000543511 LIG4P49917 911 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 RABGGTBP53611 331 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 MCL1Q07820 350 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 NCBP1Q09161 790 aaKnown RBP11.54□□□□□ -0.56
DDX11-225ENST00000543511 NOLC1Q14978 699 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX11-225ENST00000543511 FAM117BQ6P1L5 589 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 AGMOQ6ZNB7 445 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 STXBP4Q6ZWJ1 553 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 CEP120Q8N960 986 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 LPPQ93052 612 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 SMARCE1Q969G3 411 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 ZNF689Q96CS4 500 aaPredicted RBP11.54□□□□□ -0.56
DDX11-225ENST00000543511 BICD1Q96G01 975 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 ADPGKQ9BRR6 497 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 HOOK1Q9UJC3 728 aaKnown RBP11.54□□□□□ -0.56
DDX11-225ENST00000543511 MAN1B1Q9UKM7 699 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 HES2Q9Y543 173 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 ATG2AQ2TAZ0 1938 aa11.54□□□□□ -0.56
DDX11-225ENST00000543511 COL4A4P53420 1690 aaPredicted RBP11.53□□□□□ -0.56
DDX11-225ENST00000543511 A0A0B4J269 797 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 LCHNA4D1U4 455 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 SOX1O00570 391 aaPredicted RBP11.53□□□□□ -0.56
DDX11-225ENST00000543511 INPPL1O15357 1258 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 MEFVO15553 781 aaPredicted RBP11.53□□□□□ -0.56
DDX11-225ENST00000543511 TGFB1I1O43294 461 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 UPP2O95045 317 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 SMC2O95347 1197 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 EOMESO95936 686 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 MCF2P10911 925 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 MYOGP15173 224 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 BMP6P22004 513 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 ADSSP30520 456 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 GRM5P41594 1212 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 PTPN5P54829 565 aa11.53□□□□□ -0.56
DDX11-225ENST00000543511 SMAD3P84022 425 aaKnown RBP11.53□□□□□ -0.56
DDX11-225ENST00000543511 CAMK4Q16566 473 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms