RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 PARPBPQ9NWS1 579 aa5.26□□□□□ -1.57
MDM2-229ENST00000543046 PCDHA13Q9Y5I0 950 aa5.26□□□□□ -1.57
MDM2-229ENST00000543046 ACTL7AQ9Y615 435 aa5.26□□□□□ -1.57
MDM2-229ENST00000543046 MYBBP1AQ9BQG0 1328 aaKnown RBP5.25□□□□□ -1.57
MDM2-229ENST00000543046 GRXCR1A8MXD5 290 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 TEX33O43247 280 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 MGAT1P26572 445 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 PCSK1P29120 753 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 DEKP35659 375 aaKnown RBP5.25□□□□□ -1.57
MDM2-229ENST00000543046 DGCR2P98153 550 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 MTM1Q13496 603 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 TTF1Q15361 905 aaPredicted RBP5.25□□□□□ -1.57
MDM2-229ENST00000543046 UAP1L1Q3KQV9 507 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 C3orf36Q3SXR2 165 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 RABL3Q5HYI8 236 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 RRP12Q5JTH9 1297 aaKnown RBP5.25□□□□□ -1.57
MDM2-229ENST00000543046 TMEM240Q5SV17 173 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 ATXN7L2Q5T6C5 722 aaPredicted RBP5.25□□□□□ -1.57
MDM2-229ENST00000543046 CMTR2Q8IYT2 770 aaKnown RBP5.25□□□□□ -1.57
MDM2-229ENST00000543046 MIER2Q8N344 545 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 CPA6Q8N4T0 437 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 ZGPATQ8N5A5 531 aaKnown RBP5.25□□□□□ -1.57
MDM2-229ENST00000543046 OR10H5Q8NGA6 315 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 CACTINQ8WUQ7 758 aaKnown RBP5.25□□□□□ -1.57
MDM2-229ENST00000543046 RAB24Q969Q5 203 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 HOOK2Q96ED9 719 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 NDC1Q9BTX1 674 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 MRI1Q9BV20 369 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 ZNF747Q9BV97 191 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 CSRNP2Q9H175 543 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 POGKQ9P215 609 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 SORCS3Q9UPU3 1222 aa5.25□□□□□ -1.57
MDM2-229ENST00000543046 FAM20BO75063 409 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 ATP5JP18859 108 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 DDCP20711 480 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 APOBEC3AP31941 199 aaPredicted RBP5.24□□□□□ -1.57
MDM2-229ENST00000543046 RAP2BP61225 183 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 ATP8B2P98198 1209 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 CDC42EP1Q00587 391 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 MCL1Q07820 350 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 TARDBPQ13148 414 aaKnown RBP eCLIP5.24□□□□□ -1.57
MDM2-229ENST00000543046 IL10RAQ13651 578 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 OTUD7BQ6GQQ9 843 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 SYT12Q8IV01 421 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 PKNOX2Q96KN3 472 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 ZNF341Q9BYN7 854 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 TDP1Q9NUW8 608 aa5.24□□□□□ -1.57
MDM2-229ENST00000543046 EIF2B4Q9UI10 523 aaKnown RBP5.24□□□□□ -1.57
MDM2-229ENST00000543046 RUVBL1Q9Y265 456 aaKnown RBP5.24□□□□□ -1.57
MDM2-229ENST00000543046 PNPLA7Q6ZV29 1317 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 LEFTY2O00292 366 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 TRIM24O15164 1050 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 SGTAO43765 313 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 RECQL4O94761 1208 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 SCAF4O95104 1147 aaKnown RBP5.23□□□□□ -1.57
MDM2-229ENST00000543046 IL33O95760 270 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 PTTG1IPP53801 180 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 SLC25A3Q00325 362 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 NHLH2Q02577 135 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 TUBA3CQ13748 450 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 LSM12Q3MHD2 195 aaKnown RBP5.23□□□□□ -1.57
MDM2-229ENST00000543046 PPP4R3AQ6IN85 833 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 ZNF529Q6P280 563 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 TUBA3EQ6PEY2 450 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 CRIP3Q6Q6R5 217 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 SEM1Q6ZVN7 128 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 RSPH3Q86UC2 560 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 DRC7Q8IY82 874 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 CPT1CQ8TCG5 803 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 KAT5Q92993 513 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 HSPBAP1Q96EW2 488 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 TMX3Q96JJ7 454 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 MYOCQ99972 504 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 TCF7L1Q9HCS4 588 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.23□□□□□ -1.57
MDM2-229ENST00000543046 IP6K2Q9UHH9 426 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 SLC23A1Q9UHI7 598 aa5.23□□□□□ -1.57
MDM2-229ENST00000543046 DRGXA6NNA5 263 aa5.22□□□□□ -1.57
MDM2-229ENST00000543046 CHN2P52757 468 aa5.22□□□□□ -1.57
MDM2-229ENST00000543046 PIN1Q13526 163 aaPredicted RBP5.22□□□□□ -1.57
MDM2-229ENST00000543046 PLEKHG6Q3KR16 790 aa5.22□□□□□ -1.57
MDM2-229ENST00000543046 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
MDM2-229ENST00000543046 PLXDC1Q8IUK5 500 aa5.22□□□□□ -1.57
MDM2-229ENST00000543046 ANKRD13AQ8IZ07 590 aa5.22□□□□□ -1.57
MDM2-229ENST00000543046 FAM193BQ96PV7 902 aaPredicted RBP5.22□□□□□ -1.57
MDM2-229ENST00000543046 DCLRE1CQ96SD1 692 aaKnown RBP5.22□□□□□ -1.57
MDM2-229ENST00000543046 TRPM5Q9NZQ8 1165 aa5.22□□□□□ -1.57
MDM2-229ENST00000543046 PCDHB1Q9Y5F3 818 aa5.22□□□□□ -1.57
MDM2-229ENST00000543046 CFAP20Q9Y6A4 193 aaKnown RBP5.22□□□□□ -1.57
MDM2-229ENST00000543046 AHRRA9YTQ3 701 aa5.21□□□□□ -1.58
MDM2-229ENST00000543046 DIRC3C9JPN6 131 aa5.21□□□□□ -1.58
MDM2-229ENST00000543046 ABLIM3O94929 683 aa5.21□□□□□ -1.58
MDM2-229ENST00000543046 PEX11BO96011 259 aa5.21□□□□□ -1.58
MDM2-229ENST00000543046 POMCP01189 267 aa5.21□□□□□ -1.58
MDM2-229ENST00000543046 RPLP2P05387 115 aaKnown RBP5.21□□□□□ -1.58
MDM2-229ENST00000543046 C6P13671 934 aa5.21□□□□□ -1.58
MDM2-229ENST00000543046 TACR2P21452 398 aa5.21□□□□□ -1.58
MDM2-229ENST00000543046 RNASE9P60153 205 aaKnown RBP5.21□□□□□ -1.58
MDM2-229ENST00000543046 CTXN1P60606 82 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms