RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ABCF2Q9UG63 623 aa6.93□□□□□ -1.3
SUDS3-202ENST00000541280 TNNQ9UQP3 1299 aa6.93□□□□□ -1.3
SUDS3-202ENST00000541280 NUB1Q9Y5A7 615 aa6.93□□□□□ -1.3
SUDS3-202ENST00000541280 FPGT-TNNI3KV9GXZ4 949 aa6.93□□□□□ -1.3
SUDS3-202ENST00000541280 CACNA1FO60840 1977 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 GPR75-ASB3A0A0A6YYF3 556 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 SLC27A2O14975 620 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 ADCY3O60266 1144 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 B4GALT3O60512 393 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 STK10O94804 968 aaKnown RBP6.92□□□□□ -1.3
SUDS3-202ENST00000541280 CHGBP05060 677 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 PRDX5P30044 214 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 ADORA1P30542 326 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 ADAM17P78536 824 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 SPIRE1Q08AE8 756 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 IFRD2Q12894 506 aaPredicted RBP6.92□□□□□ -1.3
SUDS3-202ENST00000541280 PKN2Q16513 984 aaKnown RBP6.92□□□□□ -1.3
SUDS3-202ENST00000541280 YOD1Q5VVQ6 348 aaPredicted RBP6.92□□□□□ -1.3
SUDS3-202ENST00000541280 CDC42EP5Q6NZY7 148 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 GGNQ86UU5 652 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 CKAP2LQ8IYA6 745 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 C1QTNF3Q9BXJ4 246 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 ZNF341Q9BYN7 854 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 TMEM168Q9H0V1 697 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 L2HGDHQ9H9P8 463 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 HMG20BQ9P0W2 317 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 PCDHAC2Q9Y5I4 1007 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 GAKO14976 1311 aa6.92□□□□□ -1.3
SUDS3-202ENST00000541280 SOD2P04179 222 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 FAHP16930 419 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 PRKG1Q13976 671 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 ARHGEF6Q15052 776 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 TTF1Q15361 905 aaPredicted RBP6.91□□□□□ -1.3
SUDS3-202ENST00000541280 NAALADL2Q58DX5 795 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 MOB2Q70IA6 237 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 ERO1BQ86YB8 467 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.91□□□□□ -1.3
SUDS3-202ENST00000541280 TMEM39BQ9GZU3 492 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 CCDC113Q9H0I3 377 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 DHX36Q9H2U1 1008 aaKnown RBP6.91□□□□□ -1.3
SUDS3-202ENST00000541280 ZCCHC17Q9NP64 241 aaKnown RBP6.91□□□□□ -1.3
SUDS3-202ENST00000541280 SMPD4Q9NXE4 827 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 RAI14Q9P0K7 980 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 SCAF8Q9UPN6 1271 aaKnown RBP6.91□□□□□ -1.3
SUDS3-202ENST00000541280 MYRFQ9Y2G1 1151 aa6.91□□□□□ -1.3
SUDS3-202ENST00000541280 FAM47E-STBD1D6RA91 191 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 WNT9AO14904 365 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 PDPK1O15530 556 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 CYP1A1P04798 512 aaPredicted RBP6.9□□□□□ -1.3
SUDS3-202ENST00000541280 IFIT2P09913 472 aaKnown RBP6.9□□□□□ -1.3
SUDS3-202ENST00000541280 GNAT1P11488 350 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 MECOMQ03112 1051 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 PPATQ06203 517 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 MAP3K12Q12852 859 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 TUSC3Q13454 348 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 PAN2Q504Q3 1202 aaKnown RBP6.9□□□□□ -1.3
SUDS3-202ENST00000541280 VASNQ6EMK4 673 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 NAA16Q6N069 864 aaPredicted RBP6.9□□□□□ -1.3
SUDS3-202ENST00000541280 TMC5Q6UXY8 1006 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 KLHL36Q8N4N3 616 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 NSUN4Q96CB9 384 aaKnown RBP6.9□□□□□ -1.3
SUDS3-202ENST00000541280 EAF2Q96CJ1 260 aaPredicted RBP6.9□□□□□ -1.3
SUDS3-202ENST00000541280 WNK4Q96J92 1243 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 ZNF112Q9UJU3 913 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 TELO2Q9Y4R8 837 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 MROH7-TTC4A0A0A0MT08 1334 aa6.9□□□□□ -1.3
SUDS3-202ENST00000541280 RPAP1Q9BWH6 1393 aaPredicted RBP6.9□□□□□ -1.31
SUDS3-202ENST00000541280 BLACEA4D250 179 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 NKRFO15226 690 aaKnown RBP eCLIP6.89□□□□□ -1.31
SUDS3-202ENST00000541280 LAMTOR5O43504 91 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 CTNND1O60716 968 aaKnown RBP6.89□□□□□ -1.31
SUDS3-202ENST00000541280 CETPP11597 493 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 MCAMP43121 646 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 BTDP43251 543 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 EPHB4P54760 987 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 SNAPC2Q13487 334 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 VGLL4Q14135 290 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 ZXDCQ2QGD7 858 aaPredicted RBP6.89□□□□□ -1.31
SUDS3-202ENST00000541280 MAMDC2Q7Z304 686 aaPredicted RBP6.89□□□□□ -1.31
SUDS3-202ENST00000541280 AACSQ86V21 672 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 FOXP4Q8IVH2 680 aaPredicted RBP6.89□□□□□ -1.31
SUDS3-202ENST00000541280 SCUBE1Q8IWY4 988 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 OPTNQ96CV9 577 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 PI4KBQ9UBF8 816 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 RBPJLQ9UBG7 517 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 FTSJ1Q9UET6 329 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 CROTQ9UKG9 612 aa6.89□□□□□ -1.31
SUDS3-202ENST00000541280 CACNA1SQ13698 1873 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 CCDC88AQ3V6T2 1871 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 AOX1Q06278 1338 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 CXCL11O14625 94 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 COL6A2P12110 1019 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 RGS3P49796 1198 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 CACNB3P54284 484 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 GRIN1Q05586 938 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 TCP10Q12799 353 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 PPIL2Q13356 520 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 CPZQ66K79 652 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms