RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 LILRB5O75023 590 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 NEFLP07196 543 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 PARP1P09874 1014 aaKnown RBP5.28□□□□□ -1.56
SNHG1-214ENST00000540865 WEE2P0C1S8 567 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 TAGLNQ01995 201 aaKnown RBP5.28□□□□□ -1.56
SNHG1-214ENST00000540865 SP4Q02446 784 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 ENOX2Q16206 610 aaKnown RBP5.28□□□□□ -1.56
SNHG1-214ENST00000540865 ZNF528Q3MIS6 628 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 KCNT2Q6UVM3 1135 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 CCDC149Q6ZUS6 474 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 NLRX1Q86UT6 975 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 IQCA1Q86XH1 822 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 GALNT12Q8IXK2 581 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 C12orf76Q8N812 135 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-214ENST00000540865 ESR2Q92731 530 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 GLG1Q92896 1179 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 SECISBP2LQ93073 1101 aaKnown RBP5.28□□□□□ -1.56
SNHG1-214ENST00000540865 CCDC74AQ96AQ1 378 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 MTMR8Q96EF0 704 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 TRIM11Q96F44 468 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 CHAMP1Q96JM3 812 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 ADAM2Q99965 735 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 LACRTQ9GZZ8 138 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 TMEM117Q9H0C3 514 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 FAM49AQ9H0Q0 323 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-214ENST00000540865 RBSNQ9H1K0 784 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 SMARCAD1Q9H4L7 1026 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 KAT14Q9H8E8 782 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 HELLSQ9NRZ9 838 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 TMEM161AQ9NX61 479 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 SPG21Q9NZD8 308 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 FRRS1LQ9P0K9 344 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 DLGAP2Q9P1A6 1054 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 NCDNQ9UBB6 729 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 TELO2Q9Y4R8 837 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 PCDHA2Q9Y5H9 948 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 ATG2AQ2TAZ0 1938 aa5.28□□□□□ -1.56
SNHG1-214ENST00000540865 SMG1Q96Q15 3661 aaKnown RBP5.28□□□□□ -1.56
SNHG1-214ENST00000540865 SMIM35A0A1B0GVV1 85 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 A0A1W2PP55 124 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 GSTTP1A0A1W2PQM5 241 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 METTL12A8MUP2 240 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 NARSO43776 548 aaKnown RBP5.27□□□□□ -1.57
SNHG1-214ENST00000540865 PPP1R11O60927 126 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-214ENST00000540865 FLNBO75369 2602 aaKnown RBP5.27□□□□□ -1.57
SNHG1-214ENST00000540865 RPS6KA5O75582 802 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 CXCL14O95715 111 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 FGFR1P11362 822 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 SRFP11831 508 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 EDN3P14138 238 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 NID1P14543 1247 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 INSRRP14616 1297 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 IBSPP21815 317 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-214ENST00000540865 MARK3P27448 753 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 CDC25BP30305 580 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 IGBP1P78318 339 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 TMEM62Q0P6H9 643 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 GIT2Q14161 759 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 ACAP1Q15027 740 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 TMEM266Q2M3C6 531 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 TMC5Q6UXY8 1006 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 LRRC55Q6ZSA7 311 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 GPR149Q86SP6 731 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 CABP7Q86V35 215 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 PPFIBP1Q86W92 1011 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 TICAM2Q86XR7 235 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 TBC1D10CQ8IV04 446 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 SLC39A11Q8N1S5 342 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 LRRC43Q8N309 656 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 TMEM87AQ8NBN3 555 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 PI4K2BQ8TCG2 481 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 SLC22A17Q8WUG5 538 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 NXPE3Q969Y0 559 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 GPRASP2Q96D09 838 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 CDHR1Q96JP9 859 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 CASD1Q96PB1 797 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 DNAJC25Q9H1X3 360 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 SFXN1Q9H9B4 322 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 TBC1D17Q9HA65 648 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 SH2B1Q9NRF2 756 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-214ENST00000540865 RTEL1Q9NZ71 1219 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 FBXO4Q9UKT5 387 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 ST3GAL5Q9UNP4 418 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 SIT1Q9Y3P8 196 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 NOC2LQ9Y3T9 749 aaKnown RBP5.27□□□□□ -1.57
SNHG1-214ENST00000540865 PCDHGA2Q9Y5H1 932 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 IRAK3Q9Y616 596 aa5.27□□□□□ -1.57
SNHG1-214ENST00000540865 SPEGQ15772 3267 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 FRYQ5TBA9 3013 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 KLRF2D3W0D1 207 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 FAM229AH3BQW9 127 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 PDE2AO00408 941 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-214ENST00000540865 TBC1D4O60343 1298 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 GADD45BO75293 160 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-214ENST00000540865 SMNDC1O75940 238 aaKnown RBP eCLIP5.26□□□□□ -1.573e-14■■■■■ 31.4
SNHG1-214ENST00000540865 DCNP07585 359 aaKnown RBP5.26□□□□□ -1.57
SNHG1-214ENST00000540865 KCNA2P16389 499 aa5.26□□□□□ -1.57
SNHG1-214ENST00000540865 EPCAMP16422 314 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms