RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 MATR3P43243 847 aaKnown RBP eCLIP18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 OSTNP61366 133 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 DSG1Q02413 1049 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 CREMQ03060 361 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 ELAVL2Q12926 359 aaKnown RBP18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 SPECC1Q5M775 1068 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 KIAA0319Q5VV43 1072 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 GPR65Q8IYL9 337 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 RABGGTAQ92696 567 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 BICD1Q96G01 975 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 EPSTI1Q96J88 318 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 FBXL18Q96ME1 805 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 ZNF396Q96N95 335 aaPredicted RBP18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 ACAP3Q96P50 834 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 GPR62Q9BZJ7 368 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 ZHX3Q9H4I2 956 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 PARVGQ9HBI0 331 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 CHST7Q9NS84 486 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 STK17AQ9UEE5 414 aa18.79■□□□□ 0.6
CACNA2D4-211ENST00000540728 WEE2P0C1S8 567 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 HARSP12081 509 aaKnown RBP18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 PROZP22891 400 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 CLCN4P51793 760 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 NCKAP1LP55160 1127 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 SLC39A14Q15043 492 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 STK38Q15208 465 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 ATAT1Q5SQI0 421 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 RRAGBQ5VZM2 374 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 ZPBP2Q6X784 338 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 HAUS6Q7Z4H7 955 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 C12orf76Q8N812 135 aaPredicted RBP18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 CEP120Q8N960 986 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 KRI1Q8N9T8 703 aaKnown RBP18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 UROC1Q96N76 676 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 USP28Q96RU2 1077 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 PAAF1Q9BRP4 392 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 SFXN1Q9H9B4 322 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 RXFP1Q9HBX9 757 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 SLC38A7Q9NVC3 462 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 ANKFY1Q9P2R3 1169 aa18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 MORC2Q9Y6X9 1032 aaPredicted RBP18.78■□□□□ 0.6
CACNA2D4-211ENST00000540728 TRIP11Q15643 1979 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 K7ENM7 598 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 TEX28O15482 410 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 CLDN3O15551 220 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 BRD1O95696 1058 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 GLUD1P00367 558 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 ABCD1P33897 745 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 NOLC1Q14978 699 aaKnown RBP eCLIP18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 GLRA4Q5JXX5 417 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 USP49Q70CQ1 688 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 LRRC15Q8TF66 581 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 HASPINQ8TF76 798 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 RIN2Q8WYP3 895 aaPredicted RBP18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 FAM122AQ96E09 287 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 CLIC6Q96NY7 704 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 PPP1R10Q96QC0 940 aaKnown RBP18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 CXCL16Q9H2A7 254 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 POMKQ9H5K3 350 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 CACNG4Q9UBN1 327 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 NR2E1Q9Y466 385 aa18.77■□□□□ 0.6
CACNA2D4-211ENST00000540728 SMIM28A0A1B0GU29 152 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 TRAK2O60296 914 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 KIF4AO95239 1232 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 ZNF131P52739 623 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 NAB2Q15742 525 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 FAM171A1Q5VUB5 890 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 DCLRE1AQ6PJP8 1040 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 CCDC73Q6ZRK6 1079 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 ZBTB45Q96K62 511 aaPredicted RBP18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 B3GALT6Q96L58 329 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 TTPALQ9BTX7 342 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 FNIP2Q9P278 1114 aa18.76■□□□□ 0.59
CACNA2D4-211ENST00000540728 CITO14578 2027 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 ABLIM1O14639 778 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 TRAPPC3O43617 180 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 B3GAT3O94766 335 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 C1RP00736 705 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 PLA2G5P39877 138 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 NASPP49321 788 aaPredicted RBP18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 LIG4P49917 911 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 KYAT1Q16773 422 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 XKR4Q5GH76 650 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 KANK3Q6NY19 840 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 PDXDC1Q6P996 788 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 ALKAL1Q6UXT8 129 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 TMC5Q6UXY8 1006 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 HFE2Q6ZVN8 426 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 SV2BQ7L1I2 683 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 CEP57Q86XR8 500 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 KCNN1Q92952 543 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 DDX27Q96GQ7 796 aaKnown RBP18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 SNX27Q96L92 541 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 MAN1C1Q9NR34 630 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 TBX20Q9UMR3 447 aa18.75■□□□□ 0.59
CACNA2D4-211ENST00000540728 MUC6Q6W4X9 2439 aa18.74■□□□□ 0.59
CACNA2D4-211ENST00000540728 TRIOO75962 3097 aa18.74■□□□□ 0.59
CACNA2D4-211ENST00000540728 TMEM189-UBE2V1I3L0A0 370 aa18.74■□□□□ 0.59
CACNA2D4-211ENST00000540728 HNRNPDLO14979 420 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms