RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 CBWD1Q9BRT8 395 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 ANKFY1Q9P2R3 1169 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 IPPQ9Y573 584 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 PCDHB2Q9Y5E7 798 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 STYXL1Q9Y6J8 313 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 ZDBF2Q9HCK1 2354 aa18.24■□□□□ 0.51
UBC-208ENST00000540700 HARSP12081 509 aaKnown RBP18.24■□□□□ 0.51
UBC-208ENST00000540700 LIG4P49917 911 aa18.24■□□□□ 0.51
UBC-208ENST00000540700 PMS1P54277 932 aaKnown RBP18.24■□□□□ 0.51
UBC-208ENST00000540700 KNOP1Q1ED39 458 aaKnown RBP18.24■□□□□ 0.51
UBC-208ENST00000540700 TMEM132AQ24JP5 1023 aa18.24■□□□□ 0.51
UBC-208ENST00000540700 ZNF568Q3ZCX4 644 aa18.24■□□□□ 0.51
UBC-208ENST00000540700 AGMOQ6ZNB7 445 aa18.24■□□□□ 0.51
UBC-208ENST00000540700 ADSSL1Q8N142 457 aa18.24■□□□□ 0.51
UBC-208ENST00000540700 GUF1Q8N442 669 aaKnown RBP18.24■□□□□ 0.51
UBC-208ENST00000540700 PRSS33Q8NF86 280 aa18.24■□□□□ 0.51
UBC-208ENST00000540700 C1orf112Q9NSG2 853 aa18.24■□□□□ 0.51
UBC-208ENST00000540700 TECTAO75443 2155 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 A0A0B4J269 797 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 CLIC2O15247 247 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 LINC01565O15544 149 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 ZNF623O75123 536 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 PTMSP20962 102 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 ABCD1P33897 745 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 AFF1P51825 1210 aaKnown RBP18.23■□□□□ 0.51
UBC-208ENST00000540700 CTC1Q2NKJ3 1217 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 ZCWPW2Q504Y3 356 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 IER5LQ5T953 404 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 MRPL10Q7Z7H8 261 aaKnown RBP18.23■□□□□ 0.51
UBC-208ENST00000540700 SYCP3Q8IZU3 236 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 MED15Q96RN5 788 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 C11orf84Q9BUA3 381 aaPredicted RBP18.23■□□□□ 0.51
UBC-208ENST00000540700 TMEM206Q9H813 350 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 AGPAT3Q9NRZ7 376 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 SNTG2Q9NY99 539 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 USP34Q70CQ2 3546 aa18.23■□□□□ 0.51
UBC-208ENST00000540700 CFAP54Q96N23 3096 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 TBX10O75333 385 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 FGFR1P11362 822 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 AKAP5P24588 427 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 BMPR1AP36894 532 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 TNFSF9P41273 254 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 NCBP1Q09161 790 aaKnown RBP18.22■□□□□ 0.51
UBC-208ENST00000540700 SMAD4Q13485 552 aaKnown RBP18.22■□□□□ 0.51
UBC-208ENST00000540700 NOLC1Q14978 699 aaKnown RBP eCLIP18.22■□□□□ 0.51
UBC-208ENST00000540700 DPCR1Q3MIW9 517 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 DCAF4L1Q3SXM0 396 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 CLLU1OSQ5K130 101 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 STXBP4Q6ZWJ1 553 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 TRIML1Q8N9V2 468 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 EDAQ92838 391 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 PBXIP1Q96AQ6 731 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 GBP3Q9H0R5 595 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 PCIF1Q9H4Z3 704 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 RC3H2Q9HBD1 1191 aaKnown RBP18.22■□□□□ 0.51
UBC-208ENST00000540700 CD207Q9UJ71 328 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 EXOC7Q9UPT5 735 aa18.22■□□□□ 0.51
UBC-208ENST00000540700 TRIM49BA6NDI0 452 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 CLDN3O15551 220 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 MCF2P10911 925 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 WNT7BP56706 349 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 NLRP12P59046 1061 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 OSTNP61366 133 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 CRELD2Q6UXH1 353 aaPredicted RBP18.21■□□□□ 0.51
UBC-208ENST00000540700 NPAS4Q8IUM7 802 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 THNSL1Q8IYQ7 743 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 RNF169Q8NCN4 708 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 APOL6Q9BWW8 343 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 LMAN2LQ9H0V9 348 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 ELAC1Q9H777 363 aaKnown RBP18.21■□□□□ 0.51
UBC-208ENST00000540700 TYW1Q9NV66 732 aaKnown RBP18.21■□□□□ 0.51
UBC-208ENST00000540700 TMEM161AQ9NX61 479 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 TTC3P53804 2025 aa18.21■□□□□ 0.51
UBC-208ENST00000540700 CACNA1HO95180 2353 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 TMEM221A6NGB7 291 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 C5orf67F2Z3F1 127 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 M0R296 226 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 RECQL4O94761 1208 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 RB1P06400 928 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 GRM5P41594 1212 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 RAB27AP51159 221 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 PTPN5P54829 565 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 CENPPQ6IPU0 288 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 TRIM67Q6ZTA4 783 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 SAAL1Q96ER3 474 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 ADPGKQ9BRR6 497 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 TCHPQ9BT92 498 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 FUCA2Q9BTY2 467 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 MSTO1Q9BUK6 570 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 ALG13Q9NP73 1137 aaKnown RBP18.2■□□□□ 0.5
UBC-208ENST00000540700 DMAC2Q9NW81 257 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 HCSTQ9UBK5 93 aa18.2■□□□□ 0.5
UBC-208ENST00000540700 GOLGA8IPA6NC78 632 aa18.19■□□□□ 0.5
UBC-208ENST00000540700 GOLGA8JA6NMD2 632 aa18.19■□□□□ 0.5
UBC-208ENST00000540700 OGTO15294 1046 aa18.19■□□□□ 0.5
UBC-208ENST00000540700 DGKIO75912 1065 aa18.19■□□□□ 0.5
UBC-208ENST00000540700 LINC00271P0C7V0 271 aa18.19■□□□□ 0.5
UBC-208ENST00000540700 STAG3L1P0CL83 205 aa18.19■□□□□ 0.5
UBC-208ENST00000540700 GARTP22102 1010 aa18.19■□□□□ 0.5
UBC-208ENST00000540700 MATR3P43243 847 aaKnown RBP eCLIP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms