RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 BACH2Q9BYV9 841 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 RHOBTB2Q9BYZ6 727 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 TOPORSQ9NS56 1045 aaPredicted RBP23.01■■□□□ 1.27
CHFR-217ENST00000540537 VPS37CA5D8V6 355 aaPredicted RBP23■■□□□ 1.27
CHFR-217ENST00000540537 BRD1O95696 1058 aa23■■□□□ 1.27
CHFR-217ENST00000540537 MCF2P10911 925 aa23■■□□□ 1.27
CHFR-217ENST00000540537 LONP1P36776 959 aaKnown RBP23■■□□□ 1.27
CHFR-217ENST00000540537 UBA7P41226 1012 aa23■■□□□ 1.27
CHFR-217ENST00000540537 YARSP54577 528 aaKnown RBP23■■□□□ 1.27
CHFR-217ENST00000540537 ELAVL2Q12926 359 aaKnown RBP23■■□□□ 1.27
CHFR-217ENST00000540537 ZBTB33Q86T24 672 aa23■■□□□ 1.27
CHFR-217ENST00000540537 ZDHHC14Q8IZN3 488 aa23■■□□□ 1.27
CHFR-217ENST00000540537 PLCD3Q8N3E9 789 aa23■■□□□ 1.27
CHFR-217ENST00000540537 CEP120Q8N960 986 aa23■■□□□ 1.27
CHFR-217ENST00000540537 TMEM161BQ8NDZ6 487 aa23■■□□□ 1.27
CHFR-217ENST00000540537 FEZF2Q8TBJ5 459 aa23■■□□□ 1.27
CHFR-217ENST00000540537 HASPINQ8TF76 798 aa23■■□□□ 1.27
CHFR-217ENST00000540537 FAM122AQ96E09 287 aa23■■□□□ 1.27
CHFR-217ENST00000540537 CALML4Q96GE6 196 aa23■■□□□ 1.27
CHFR-217ENST00000540537 TTPALQ9BTX7 342 aa23■■□□□ 1.27
CHFR-217ENST00000540537 PLEKHA4Q9H4M7 779 aa23■■□□□ 1.27
CHFR-217ENST00000540537 MUC6Q6W4X9 2439 aa23■■□□□ 1.27
CHFR-217ENST00000540537 CITO14578 2027 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 TMEM189-UBE2V1I3L0A0 370 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 ABLIM1O14639 778 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 PAPLNO95428 1278 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 STRN3Q13033 797 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 SF3A1Q15459 793 aaKnown RBP22.99■■□□□ 1.27
CHFR-217ENST00000540537 XKR4Q5GH76 650 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 GLRA4Q5JXX5 417 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 RTP2Q5QGT7 225 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 MPZL3Q6UWV2 235 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 ALKAL1Q6UXT8 129 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 CCDC149Q6ZUS6 474 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 PIK3R5Q8WYR1 880 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 UROC1Q96N76 676 aa22.99■■□□□ 1.27
CHFR-217ENST00000540537 LARSQ9P2J5 1176 aaKnown RBP22.99■■□□□ 1.27
CHFR-217ENST00000540537 VWA8A3KMH1 1905 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 TGM5O43548 720 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 MAPTP10636 758 aaKnown RBP22.98■■□□□ 1.27
CHFR-217ENST00000540537 ARSHQ5FYA8 562 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 FAM171A1Q5VUB5 890 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 LILRA6Q6PI73 481 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 PALB2Q86YC2 1186 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 TCHPQ9BT92 498 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 KCNH6Q9H252 994 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 ODF2LQ9ULJ1 636 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 SORCS3Q9UPU3 1222 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 ZDBF2Q9HCK1 2354 aa22.98■■□□□ 1.27
CHFR-217ENST00000540537 SMIM28A0A1B0GU29 152 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 CCDC195A0A1B0GUA6 201 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 H0YCG3 227 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 TOM1L1O75674 476 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 RPL17P18621 184 aaKnown RBP22.97■■□□□ 1.27
CHFR-217ENST00000540537 PDXDC1Q6P996 788 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 DCLRE1AQ6PJP8 1040 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 PRSS55Q6UWB4 352 aaPredicted RBP22.97■■□□□ 1.27
CHFR-217ENST00000540537 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.97■■□□□ 1.27
CHFR-217ENST00000540537 OTOP3Q7RTS5 596 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 KREMEN2Q8NCW0 462 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 LNX1Q8TBB1 728 aaPredicted RBP22.97■■□□□ 1.27
CHFR-217ENST00000540537 KCNN1Q92952 543 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 PBXIP1Q96AQ6 731 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 ACSF2Q96CM8 615 aaPredicted RBP22.97■■□□□ 1.27
CHFR-217ENST00000540537 INTS4Q96HW7 963 aaKnown RBP22.97■■□□□ 1.27
CHFR-217ENST00000540537 SNX27Q96L92 541 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 SLC38A7Q9NVC3 462 aa22.97■■□□□ 1.27
CHFR-217ENST00000540537 NPHP3-ACAD11A0A0J9YXS1 232 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 B3GAT3O94766 335 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 PLCG1P19174 1290 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 NCKAP1LP55160 1127 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 OSTNP61366 133 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 CACNB1Q02641 598 aaPredicted RBP22.96■■□□□ 1.27
CHFR-217ENST00000540537 GRIN1Q05586 938 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 MTMR3Q13615 1198 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 PSMD5Q16401 504 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 ZPBP2Q6X784 338 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 GPBP1Q86WP2 473 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 CEP57Q86XR8 500 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 GLYCTKQ8IVS8 523 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 UBALD2Q8IYN6 164 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 LRRC15Q8TF66 581 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 ASIC4Q96FT7 647 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 ACAP3Q96P50 834 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 BLOC1S4Q9NUP1 217 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 ZDHHC7Q9NXF8 308 aa22.96■■□□□ 1.27
CHFR-217ENST00000540537 RFPL2O75678 378 aa22.95■■□□□ 1.26
CHFR-217ENST00000540537 SPATA31D3P0C874 917 aa22.95■■□□□ 1.26
CHFR-217ENST00000540537 KCNE1P15382 129 aa22.95■■□□□ 1.26
CHFR-217ENST00000540537 CLCNKBP51801 687 aa22.95■■□□□ 1.26
CHFR-217ENST00000540537 NOLC1Q14978 699 aaKnown RBP eCLIP22.95■■□□□ 1.26
CHFR-217ENST00000540537 KARSQ15046 597 aaKnown RBP22.95■■□□□ 1.26
CHFR-217ENST00000540537 UPP1Q16831 310 aa22.95■■□□□ 1.26
CHFR-217ENST00000540537 SPATA31D4Q6ZUB0 917 aa22.95■■□□□ 1.26
CHFR-217ENST00000540537 SMG7Q92540 1137 aaKnown RBP22.95■■□□□ 1.26
CHFR-217ENST00000540537 RAD54LQ92698 747 aa22.95■■□□□ 1.26
CHFR-217ENST00000540537 ZNF707Q96C28 371 aaPredicted RBP22.95■■□□□ 1.26
CHFR-217ENST00000540537 DDX27Q96GQ7 796 aaKnown RBP22.95■■□□□ 1.26
CHFR-217ENST00000540537 ZBTB45Q96K62 511 aaPredicted RBP22.95■■□□□ 1.26
CHFR-217ENST00000540537 CLSTN3Q9BQT9 956 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms