RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ITGA4P13612 1032 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 AXLP30530 894 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 NEK4P51957 841 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 PRKCEQ02156 737 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 ADCY1Q08828 1119 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 RTN1Q16799 776 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 MTERF2Q49AM1 385 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 PPM1JQ5JR12 505 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 LAIR1Q6GTX8 287 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 PARM1Q6UWI2 310 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 GET4Q7L5D6 327 aaPredicted RBP6.63□□□□□ -1.35
CPSF7-219ENST00000539952 MICU3Q86XE3 530 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 ZNF687Q8N1G0 1237 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 BICD2Q8TD16 824 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 FGF14Q92915 247 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 MBOAT7Q96N66 472 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 CEP89Q96ST8 783 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 IER2Q9BTL4 223 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 TEKT3Q9BXF9 490 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 AGPAT5Q9NUQ2 364 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 KCNH3Q9ULD8 1083 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 PRG3Q9Y2Y8 225 aaPredicted RBP6.63□□□□□ -1.35
CPSF7-219ENST00000539952 R3HCC1Q9Y3T6 440 aaKnown RBP6.63□□□□□ -1.35
CPSF7-219ENST00000539952 MTF2Q9Y483 593 aaPredicted RBP6.63□□□□□ -1.35
CPSF7-219ENST00000539952 PPME1Q9Y570 386 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.63□□□□□ -1.35
CPSF7-219ENST00000539952 VPS13AQ96RL7 3174 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 FANCMQ8IYD8 2048 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 MYH9P35579 1960 aaKnown RBP6.62□□□□□ -1.35
CPSF7-219ENST00000539952 TCHHQ07283 1943 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 MSH4O15457 936 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 ZBTB43O43298 467 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 GAS7O60861 476 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 XYLBO75191 536 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 TADA2AO75478 443 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 MYBP10242 640 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 HOXA9P31269 272 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 HOXA11P31270 313 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-219ENST00000539952 CNR2P34972 360 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 AFF1P51825 1210 aaKnown RBP6.62□□□□□ -1.35
CPSF7-219ENST00000539952 RCAN1P53805 252 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 DSC1Q08554 894 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 DMWDQ09019 674 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 SPEM2Q0P670 501 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 FUT2Q10981 343 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 DRP2Q13474 957 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 COL9A3Q14050 684 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-219ENST00000539952 NECTIN1Q15223 517 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 CSRP2Q16527 193 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 PFKFB3Q16875 520 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-219ENST00000539952 APOA5Q6Q788 366 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 MIER3Q7Z3K6 550 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 GRASPQ7Z6J2 395 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-219ENST00000539952 PACS2Q86VP3 889 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 RAB11FIP4Q86YS3 637 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 HACE1Q8IYU2 909 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 REXO1Q8N1G1 1221 aaKnown RBP6.62□□□□□ -1.35
CPSF7-219ENST00000539952 GPT2Q8TD30 523 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 SLC5A5Q92911 643 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 FGF13Q92913 245 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 TMX3Q96JJ7 454 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 ZSCAN31Q96LW9 406 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-219ENST00000539952 ESYT1Q9BSJ8 1104 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 PHF20Q9BVI0 1012 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 IFT122Q9HBG6 1241 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 MARCH5Q9NX47 278 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 ANGPTL2Q9UKU9 493 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 VPS9D1Q9Y2B5 631 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 GIT1Q9Y2X7 761 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 MYO15AQ9UKN7 3530 aa6.62□□□□□ -1.35
CPSF7-219ENST00000539952 CNTNAP5Q8WYK1 1306 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 UQCRHLA0A096LP55 91 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-219ENST00000539952 ARL5CA6NH57 179 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 SLC27A2O14975 620 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 PRPF3O43395 683 aaKnown RBP6.61□□□□□ -1.35
CPSF7-219ENST00000539952 B4GALT3O60512 393 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 ECI2O75521 394 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 PSMD10O75832 226 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 STBD1O95210 358 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 UQCRHP07919 91 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 POU2F2P09086 479 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 SRGAP2CP0DJJ0 459 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 CD72P21854 359 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 PSMC5P62195 406 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 EXOSC10Q01780 885 aaKnown RBP6.61□□□□□ -1.35
CPSF7-219ENST00000539952 POU5F1BQ06416 359 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 FZD5Q13467 585 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 Q4G0T1 1027 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 PPM1LQ5SGD2 360 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 UBXN11Q5T124 520 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 CCDC183Q5T5S1 534 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 LIN9Q5TKA1 542 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 RNF20Q5VTR2 975 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 LRCH2Q5VUJ6 765 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 FUT10Q6P4F1 479 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 PDXDC1Q6P996 788 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 DHX32Q7L7V1 743 aaKnown RBP6.61□□□□□ -1.35
CPSF7-219ENST00000539952 OTUD6AQ7L8S5 288 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 KSR1Q8IVT5 923 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms