RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 HCSTQ9UBK5 93 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 PLAAQ9Y263 795 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 MYH7P12883 1935 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 RLFQ13129 1914 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 LTBP2Q14767 1821 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 FRMPD3Q5JV73 1810 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 TRIM43BA6NCK2 446 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 CCT8L1PA6NM43 557 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 TREHO43280 583 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 COBLO75128 1261 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 PRDM1O75626 825 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 CLTBP09497 229 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 FAM153BP0C7A2 387 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 RARBP10826 455 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 FCER1AP12319 257 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 DRD4P21917 467 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 HSD17B3P37058 310 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 ADCYAP1R1P41586 468 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 FKBP3Q00688 224 aaKnown RBP8.26□□□□□ -1.09
CCDC60-204ENST00000539847 TLE2Q04725 743 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 STK4Q13043 487 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 RPS6KA1Q15418 735 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 ZYXQ15942 572 aaKnown RBP8.26□□□□□ -1.09
CCDC60-204ENST00000539847 FAM153CQ494X1 144 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 TRIM60Q495X7 471 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 C9orf50Q5SZB4 431 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 ERMARDQ5T6L9 678 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 SFMBT2Q5VUG0 894 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 CCDC174Q6PII3 467 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 RRAGAQ7L523 313 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 ANKRD33Q7Z3H0 272 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 PIGWQ7Z7B1 504 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 SLFN11Q7Z7L1 901 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 RNF180Q86T96 592 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 ZC3H3Q8IXZ2 948 aaKnown RBP8.26□□□□□ -1.09
CCDC60-204ENST00000539847 SYCE1Q8N0S2 351 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 CMTR1Q8N1G2 835 aaKnown RBP8.26□□□□□ -1.09
CCDC60-204ENST00000539847 SH2D3CQ8N5H7 860 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 ANKS4BQ8N8V4 417 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 MIGA1Q8NAN2 632 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 CFAP61Q8NHU2 1237 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 TRIM43Q96BQ3 446 aaPredicted RBP8.26□□□□□ -1.09
CCDC60-204ENST00000539847 ZBTB9Q96C00 473 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 MTMR8Q96EF0 704 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 PGM2Q96G03 612 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 CALML4Q96GE6 196 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 MAML3Q96JK9 1138 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 CCDC17Q96LX7 622 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 CDK15Q96Q40 435 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 OSBPL7Q9BZF2 842 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 CRNKL1Q9BZJ0 848 aaKnown RBP8.26□□□□□ -1.09
CCDC60-204ENST00000539847 TTYH1Q9H313 450 aaPredicted RBP8.26□□□□□ -1.09
CCDC60-204ENST00000539847 FAM153AQ9UHL3 310 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 FBXL5Q9UKA1 691 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 ADAMTS5Q9UNA0 930 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 MAPK8IP1Q9UQF2 711 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 DAAM1Q9Y4D1 1078 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 CDK5RAP2Q96SN8 1893 aa8.26□□□□□ -1.09
CCDC60-204ENST00000539847 SPTBN5Q9NRC6 3674 aaKnown RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 CDH23Q9H251 3354 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 A0A1W2PRG0 241 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 ESYT2A0FGR8 921 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 LRRC53A6NM62 1247 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 MINDY4BA8MYZ0 360 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 hCG_1984214I3L0E3 225 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 WDR46O15213 610 aaKnown RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 SART1O43290 800 aaKnown RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 PPFIA2O75334 1257 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 NUDT17P0C025 328 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 OR52Z1P0C646 297 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 FOSL2P15408 326 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 FSHRP23945 695 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 MPSTP25325 297 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 GNA11P29992 359 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 MATR3P43243 847 aaKnown RBP eCLIP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 RPIAP49247 311 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 CCNG1P51959 295 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 SEC24CP53992 1094 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 ASIC1P78348 528 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 ICA1Q05084 483 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 EHHADHQ08426 723 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 ZNF844Q08AG5 666 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 ZNF268Q14587 947 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 GRM4Q14833 912 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 SKIDA1Q1XH10 827 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 KCTD16Q68DU8 428 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 BTNL9Q6UXG8 535 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 LIAT1Q6ZQX7 453 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 HOOK3Q86VS8 718 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 RIOX2Q8IUF8 465 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 STAG2Q8N3U4 1231 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 ZNF713Q8N859 430 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 GBP7Q8N8V2 638 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-204ENST00000539847 CCDC197Q8NCU1 140 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 IFT81Q8WYA0 676 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 RAPGEF5Q92565 580 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 CUL5Q93034 780 aa8.25□□□□□ -1.09
CCDC60-204ENST00000539847 EMID1Q96A84 441 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms