RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 B3GAT3O94766 335 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 HNRNPA1P09651 372 aaKnown RBP eCLIP16.81■□□□□ 0.28
UBE3B-211ENST00000539843 RPL17P18621 184 aaKnown RBP16.81■□□□□ 0.28
UBE3B-211ENST00000539843 PRPHP41219 470 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 PEX3P56589 373 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 ZNF568Q3ZCX4 644 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 RTP2Q5QGT7 225 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 PRSS55Q6UWB4 352 aaPredicted RBP16.81■□□□□ 0.28
UBE3B-211ENST00000539843 KCTD17Q8N5Z5 321 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 IGSF22Q8N9C0 903 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 TCHPQ9BT92 498 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 KMT5AQ9NQR1 393 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 FBXW11Q9UKB1 542 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 TNFSF13BQ9Y275 285 aa16.81■□□□□ 0.28
UBE3B-211ENST00000539843 PTGESO14684 152 aa16.8■□□□□ 0.28
UBE3B-211ENST00000539843 SMTNP53814 917 aa16.8■□□□□ 0.28
UBE3B-211ENST00000539843 STRN3Q13033 797 aa16.8■□□□□ 0.28
UBE3B-211ENST00000539843 NBR1Q14596 966 aa16.8■□□□□ 0.28
UBE3B-211ENST00000539843 ZRSR1Q15695 479 aaKnown RBP16.8■□□□□ 0.28
UBE3B-211ENST00000539843 DCLRE1AQ6PJP8 1040 aa16.8■□□□□ 0.28
UBE3B-211ENST00000539843 SIX5Q8N196 739 aa16.8■□□□□ 0.28
UBE3B-211ENST00000539843 DDX27Q96GQ7 796 aaKnown RBP16.8■□□□□ 0.28
UBE3B-211ENST00000539843 SMOC2Q9H3U7 446 aa16.8■□□□□ 0.28
UBE3B-211ENST00000539843 TMEM134Q9H6X4 195 aa16.8■□□□□ 0.28
UBE3B-211ENST00000539843 POLIQ9UNA4 740 aa16.8■□□□□ 0.28
UBE3B-211ENST00000539843 PCDHB6Q9Y5E3 794 aa16.8■□□□□ 0.28
UBE3B-211ENST00000539843 H0Y858 1186 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 TMEM189-UBE2V1I3L0A0 370 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 GFRA3O60609 400 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 C8AP07357 584 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 FSHRP23945 695 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 HOXA9P31269 272 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 EEF1DP3Q658K8 133 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 LILRA6Q6PI73 481 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 ANKS3Q6ZW76 656 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 RTL10Q7L3V2 364 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 C4orf32Q8N8J7 132 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 TMEM105Q8N8V8 129 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 ZNF707Q96C28 371 aaPredicted RBP16.79■□□□□ 0.28
UBE3B-211ENST00000539843 PAAF1Q9BRP4 392 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 FAM86C1Q9NVL1 165 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 WNT16Q9UBV4 365 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 DENND4AQ7Z401 1863 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 KMT2EQ8IZD2 1858 aa16.79■□□□□ 0.28
UBE3B-211ENST00000539843 TTLL13PA6NNM8 815 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 H0YCG3 227 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 HIP1RO75146 1068 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 SRFP11831 508 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 AOC1P19801 751 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 GRM5P41594 1212 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 NPTX2P47972 431 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 ECM1Q16610 540 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 UVSSAQ2YD98 709 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 GLRA4Q5JXX5 417 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 MTSS1LQ765P7 747 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 LNX1Q8TBB1 728 aaPredicted RBP16.78■□□□□ 0.28
UBE3B-211ENST00000539843 CACNG4Q9UBN1 327 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 NUB1Q9Y5A7 615 aa16.78■□□□□ 0.28
UBE3B-211ENST00000539843 E9PMD0 336 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 PAPLNO95428 1278 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 CFHP08603 1231 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 MCF2P10911 925 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 LAMP2P13473 410 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 ELF1P32519 619 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 MCM2P49736 904 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 NT5DC1Q5TFE4 455 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 ACAP3Q96P50 834 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 PPP1R10Q96QC0 940 aaKnown RBP16.77■□□□□ 0.28
UBE3B-211ENST00000539843 MYADMQ96S97 322 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 ACO2Q99798 780 aaKnown RBP16.77■□□□□ 0.28
UBE3B-211ENST00000539843 CLSTN3Q9BQT9 956 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 POLD4Q9HCU8 107 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.77■□□□□ 0.28
UBE3B-211ENST00000539843 KCND2Q9NZV8 630 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 USP20Q9Y2K6 914 aa16.77■□□□□ 0.28
UBE3B-211ENST00000539843 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.77■□□□□ 0.28
UBE3B-211ENST00000539843 FGFR3P22607 806 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 OR1D2P34982 312 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 MATR3P43243 847 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBE3B-211ENST00000539843 TOB1P50616 345 aaPredicted RBP16.76■□□□□ 0.27
UBE3B-211ENST00000539843 CLCNKBP51801 687 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 OSTNP61366 133 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 RAB33AQ14088 237 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 RINT1Q6NUQ1 792 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 MPZL3Q6UWV2 235 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 GRASPQ7Z6J2 395 aaPredicted RBP16.76■□□□□ 0.27
UBE3B-211ENST00000539843 SLC44A3Q8N4M1 653 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 SLC7A14Q8TBB6 771 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 FEZF2Q8TBJ5 459 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 PHOX2BQ99453 314 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 CDT1Q9H211 546 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 ARHGAP28Q9P2N2 729 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 MTRRQ9UBK8 725 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 CDH7Q9ULB5 785 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 BACE2Q9Y5Z0 518 aa16.76■□□□□ 0.27
UBE3B-211ENST00000539843 SMIM28A0A1B0GU29 152 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 H7C4K7 107 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 N4BP1O75113 896 aaKnown RBP16.75■□□□□ 0.27
UBE3B-211ENST00000539843 POU2F2P09086 479 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 HARSP12081 509 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms