RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 PLS3P13797 630 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 IGFBP6P24592 240 aaPredicted RBP13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 UBA7P41226 1012 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 GRM5P41594 1212 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 MATR3P43243 847 aaKnown RBP eCLIP13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SMTNP53814 917 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 CREMQ03060 361 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 GRIN1Q05586 938 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 CUL4AQ13619 759 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 GPBP1Q86WP2 473 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SMG7Q92540 1137 aaKnown RBP13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 ZBTB45Q96K62 511 aaPredicted RBP13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 AK8Q96MA6 479 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 TTPALQ9BTX7 342 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SMOC2Q9H3U7 446 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 C17orf75Q9HAS0 396 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 PIDD1Q9HB75 910 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 TOPORSQ9NS56 1045 aaPredicted RBP13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 DPP7Q9UHL4 492 aa13.98□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 B3GAT3O94766 335 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 PLCG1P19174 1290 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 CLCNKBP51801 687 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 MTMR3Q13615 1198 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 KARSQ15046 597 aaKnown RBP13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 PSMD5Q16401 504 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SEZ6Q53EL9 994 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 MPZL3Q6UWV2 235 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 C15orf39Q6ZRI6 1047 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SUGP1Q8IWZ8 645 aaKnown RBP13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 TMEM161BQ8NDZ6 487 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 ACSF2Q96CM8 615 aaPredicted RBP13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 BICD1Q96G01 975 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 ACAP3Q96P50 834 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 PPP1R10Q96QC0 940 aaKnown RBP13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 PTPRHQ9HD43 1115 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 FNIP2Q9P278 1114 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SORCS3Q9UPU3 1222 aa13.97□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 C2orf16Q68DN1 1984 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 DENND4AQ7Z401 1863 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SMIM28A0A1B0GU29 152 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 I3L4J1 428 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 BRD1O95696 1058 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 BMP15O95972 392 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 KRT18P05783 430 aaKnown RBP13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 MAPTP10636 758 aaKnown RBP13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 MCF2P10911 925 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 PDCP20941 246 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 GBP2P32456 591 aaPredicted RBP13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 LONP1P36776 959 aaKnown RBP13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SOX4Q06945 474 aaPredicted RBP13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 ELAVL2Q12926 359 aaKnown RBP13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 MCM6Q14566 821 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 ARSHQ5FYA8 562 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SPECC1Q5M775 1068 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 OTOP3Q7RTS5 596 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 ZDHHC14Q8IZN3 488 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 KCTD17Q8N5Z5 321 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 CMASQ8NFW8 434 aaPredicted RBP13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 LRRC15Q8TF66 581 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SPIRE2Q8WWL2 714 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 PIK3R5Q8WYR1 880 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 ASIC4Q96FT7 647 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 SNX27Q96L92 541 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 REEP2Q9BRK0 252 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 ZHX3Q9H4I2 956 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 PLEKHA4Q9H4M7 779 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 KCND2Q9NZV8 630 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 LARSQ9P2J5 1176 aaKnown RBP13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 USTQ9Y2C2 406 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 CLIC4Q9Y696 253 aa13.96□□□□□ -0.17
TSPAN9-IT1-201ENST00000539784 CLUHO75153 1309 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 TECTAO75443 2155 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 ABLIM1O14639 778 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 ADAM12O43184 909 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 TOM1L1O75674 476 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 FAM13AO94988 1023 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 PDGFBP01127 241 aaPredicted RBP13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 PROZP22891 400 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 MARCKSP29966 332 aaPredicted RBP13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 BRCC3P46736 316 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 CEBPZQ03701 1054 aaKnown RBP13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 NOLC1Q14978 699 aaKnown RBP eCLIP13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 UPP1Q16831 310 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 FAM173BQ6P4H8 233 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 LILRA6Q6PI73 481 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 DCLRE1AQ6PJP8 1040 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 BMP8AQ7Z5Y6 402 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 GPR65Q8IYL9 337 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 FBXL6Q8N531 539 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 MYCT1Q8N699 235 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 C3orf58Q8NDZ4 430 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 LNX1Q8TBB1 728 aaPredicted RBP13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 ZNF707Q96C28 371 aaPredicted RBP13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 UROC1Q96N76 676 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 ZMAT2Q96NC0 199 aaKnown RBP13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 CLSTN3Q9BQT9 956 aa13.95□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 NTPCRQ9BSD7 190 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms