RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 NDUFA8P51970 172 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 KRT17Q04695 432 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 MCL1Q07820 350 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 GRIK3Q13003 919 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 COASYQ13057 564 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 ADAM15Q13444 863 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 NOLC1Q14978 699 aaKnown RBP eCLIP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 XKR4Q5GH76 650 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 HERC4Q5GLZ8 1057 aaPredicted RBP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 ADALQ6DHV7 355 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 ZPBP2Q6X784 338 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 TMC7Q7Z402 723 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 DDX53Q86TM3 631 aaKnown RBP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 MAP4K3Q8IVH8 894 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 HACE1Q8IYU2 909 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 RNF168Q8IYW5 571 aaPredicted RBP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 IQUBQ8NA54 791 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 C3orf58Q8NDZ4 430 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 C18orf25Q96B23 403 aaPredicted RBP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 PABPC5Q96DU9 382 aaKnown RBP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 BICD1Q96G01 975 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 SNX27Q96L92 541 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 ASB2Q96Q27 587 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 RPS6KC1Q96S38 1066 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 COL25A1Q9BXS0 654 aaPredicted RBP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 GPR62Q9BZJ7 368 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 TNMDQ9H2S6 317 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 ST6GALNAC4Q9H4F1 302 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 TLE6Q9H808 572 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 MRPL44Q9H9J2 332 aaKnown RBP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 FAM13BQ9NYF5 915 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 BARX2Q9UMQ3 279 aaPredicted RBP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 VWA8A3KMH1 1905 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 HNRNPDLO14979 420 aaKnown RBP11.71□□□□□ -0.53
HMGA2-209ENST00000539662 CLDN3O15551 220 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 LILRB3O75022 631 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 KIF4AO95239 1232 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 GCNT3O95395 438 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 THP07101 528 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 CXCL8P10145 99 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 CMA1P23946 247 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 CA8P35219 290 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 MATR3P43243 847 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■■□□ 16.6
HMGA2-209ENST00000539662 LIG4P49917 911 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 CLCNKBP51801 687 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 WNT7BP56706 349 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 TUSC3Q13454 348 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 KCNC3Q14003 757 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 DUSP6Q16828 381 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 KANK3Q6NY19 840 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 LLGL2Q6P1M3 1020 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 MRPL43Q8N983 215 aaKnown RBP11.71□□□□□ -0.53
HMGA2-209ENST00000539662 PAGE5Q96GU1 130 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 FAM84AQ96KN4 292 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 ACAP3Q96P50 834 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 C7orf25Q9BPX7 421 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 CCDC94Q9BW85 323 aaPredicted RBP11.71□□□□□ -0.53
HMGA2-209ENST00000539662 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.53
HMGA2-209ENST00000539662 CDH22Q9UJ99 828 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 PLXNA3P51805 1871 aa11.71□□□□□ -0.53
HMGA2-209ENST00000539662 ZMYM2Q9UBW7 1377 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 A0A0B4J269 797 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 FAM237AA0A1B0GTK4 181 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 LACTBL1A8MY62 500 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 H0YCG3 227 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 I3L4J1 428 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 C2CD2LO14523 706 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 KLRC4O43908 158 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 CLASP2O75122 1294 aaKnown RBP11.7□□□□□ -0.54
HMGA2-209ENST00000539662 CTSAP10619 480 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 IL9P15248 144 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 GAP43P17677 238 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 GUCY2FP51841 1108 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 ASIC1P78348 528 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 NUCB2P80303 420 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 MRPS5P82675 430 aaKnown RBP11.7□□□□□ -0.54
HMGA2-209ENST00000539662 EHHADHQ08426 723 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 HSP90AA2PQ14568 343 aaPredicted RBP11.7□□□□□ -0.54
HMGA2-209ENST00000539662 PTPN14Q15678 1187 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 ENOX2Q16206 610 aaKnown RBP11.7□□□□□ -0.54
HMGA2-209ENST00000539662 SCARA3Q6AZY7 606 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 CRELD2Q6UXH1 353 aaPredicted RBP11.7□□□□□ -0.54
HMGA2-209ENST00000539662 EFHBQ8N7U6 833 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 FSIP1Q8NA03 581 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 ATXN2LQ8WWM7 1075 aaKnown RBP11.7□□□□□ -0.54
HMGA2-209ENST00000539662 RSPH1Q8WYR4 309 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 APOL5Q9BWW9 433 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 CUEDC2Q9H467 287 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 OLFML3Q9NRN5 406 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 TUBGCP4Q9UGJ1 667 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 KCNG1Q9UIX4 513 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 COG5Q9UP83 839 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 TTC28Q96AY4 2481 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 BDP1A6H8Y1 2624 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 MUC3AQ02505 3323 aa11.7□□□□□ -0.54
HMGA2-209ENST00000539662 CUL9Q8IWT3 2517 aa11.69□□□□□ -0.54
HMGA2-209ENST00000539662 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.69□□□□□ -0.54
HMGA2-209ENST00000539662 TTC26A0AVF1 554 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms