RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 IWS1Q96ST2 819 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 TMX4Q9H1E5 349 aaPredicted RBP10.33□□□□□ -0.76
CDH13-204ENST00000539548 ECT2Q9H8V3 914 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 DBNDD1Q9H9R9 158 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 ARHGEF10LQ9HCE6 1279 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 ASIC3Q9UHC3 531 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 TMX2Q9Y320 296 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 CD2APQ9Y5K6 639 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 ZNF646O15015 1829 aaPredicted RBP10.33□□□□□ -0.76
CDH13-204ENST00000539548 COL2A1P02458 1487 aaPredicted RBP10.33□□□□□ -0.76
CDH13-204ENST00000539548 GRIN3BO60391 1043 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 SORBS3O60504 671 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 ADRB2P07550 413 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 CHKAP35790 457 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 GPC3P51654 580 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 MAP2K1Q02750 393 aaPredicted RBP10.33□□□□□ -0.76
CDH13-204ENST00000539548 NUGGCQ68CJ6 796 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 MAEAQ7L5Y9 396 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 OTUD6AQ7L8S5 288 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 SPATA21Q7Z572 469 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 MGARPQ8TDB4 240 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 HELQQ8TDG4 1101 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 DDX1Q92499 740 aaKnown RBP10.33□□□□□ -0.76
CDH13-204ENST00000539548 KIFAP3Q92845 792 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 DEFB129Q9H1M3 183 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 KCNK9Q9NPC2 374 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 ACP6Q9NPH0 428 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 LGALS13Q9UHV8 139 aa10.33□□□□□ -0.76
CDH13-204ENST00000539548 PLA2G6O60733 806 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 LYPLA2O95372 231 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 ECE1P42892 770 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 RARRES1P49788 294 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 ITGA8P53708 1063 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 KCNJ2P63252 427 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 SNX1Q13596 522 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 MPP2Q14168 576 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 CRYMQ14894 314 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 KYNUQ16719 465 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 CLEC16AQ2KHT3 1053 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 KRT39Q6A163 491 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 NSMFQ6X4W1 530 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 ATL2Q8NHH9 583 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 MIEF2Q96C03 454 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 TBC1D31Q96DN5 1066 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 L3MBTL3Q96JM7 780 aaPredicted RBP10.32□□□□□ -0.76
CDH13-204ENST00000539548 IFT74Q96LB3 600 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 TIPINQ9BVW5 301 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 TRAIPQ9BWF2 469 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 DCLK3Q9C098 648 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 RXFP1Q9HBX9 757 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 CHST7Q9NS84 486 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 ANAPC5Q9UJX4 755 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 SUFUQ9UMX1 484 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 ZHX2Q9Y6X8 837 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 SCN9AQ15858 1988 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 DHX15O43143 795 aaKnown RBP10.32□□□□□ -0.76
CDH13-204ENST00000539548 GAS8O95995 478 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 BRAFP15056 766 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 ITGB5P18084 799 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 IBSPP21815 317 aaPredicted RBP10.32□□□□□ -0.76
CDH13-204ENST00000539548 CCND1P24385 295 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 MAPK4P31152 587 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 SLC1A1P43005 524 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 ALDH5A1P51649 535 aaPredicted RBP10.32□□□□□ -0.76
CDH13-204ENST00000539548 NCKAP1LP55160 1127 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 SLC8A3P57103 927 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 TNIP1Q15025 636 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 ACCSLQ4AC99 568 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 SLC27A3Q5K4L6 730 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDH13-204ENST00000539548 NIPA1Q7RTP0 329 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 RELL1Q8IUW5 271 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 SLC17A8Q8NDX2 589 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 TMC2Q8TDI7 906 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 ACER1Q8TDN7 264 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 PARD3BQ8TEW8 1205 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 GRAMD1AQ96CP6 724 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 STAMBPL1Q96FJ0 436 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 FAM81BQ96LP2 452 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 MAGEB18Q96M61 343 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 NT5C1BQ96P26 610 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 TDRD3Q9H7E2 651 aaKnown RBP10.32□□□□□ -0.76
CDH13-204ENST00000539548 TMEM8AQ9HCN3 771 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 AVENQ9NQS1 362 aaPredicted RBP10.32□□□□□ -0.76
CDH13-204ENST00000539548 ARHGEF3Q9NR81 526 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 NINJ2Q9NZG7 142 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 HERC5Q9UII4 1024 aaKnown RBP10.32□□□□□ -0.76
CDH13-204ENST00000539548 NEU2Q9Y3R4 380 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 ACTL7BQ9Y614 415 aa10.32□□□□□ -0.76
CDH13-204ENST00000539548 GOLGA8IPA6NC78 632 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 GOLGA8JA6NMD2 632 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 DDX39AO00148 427 aaKnown RBP10.31□□□□□ -0.76
CDH13-204ENST00000539548 IGF2BP3O00425 579 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDH13-204ENST00000539548 THAP12O43422 761 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 ANP32DO95626 131 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 ATF2P15336 505 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 GBP2P32456 591 aaPredicted RBP10.31□□□□□ -0.76
CDH13-204ENST00000539548 PDE6BP35913 854 aa10.31□□□□□ -0.76
CDH13-204ENST00000539548 QARSP47897 775 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms