RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 ZGPATQ8N5A5 531 aaKnown RBP3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 GPATCH11Q8N954 259 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 KBTBD3Q8NAB2 608 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TMEM52Q8NDY8 209 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 FRS2Q8WU20 508 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 KISS1RQ969F8 398 aaPredicted RBP3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TRIM63Q969Q1 353 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 GCC1Q96CN9 775 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 EXOC2Q96KP1 924 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 WRNIP1Q96S55 665 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 KCNJ15Q99712 375 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SENP7Q9BQF6 1050 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SGPP1Q9BX95 441 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 RWDD1Q9H446 243 aaPredicted RBP3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ZHX3Q9H4I2 956 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NCOA5Q9HCD5 579 aaKnown RBP3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CYP26B1Q9NR63 512 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CLDND1Q9NY35 253 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 FBLN5Q9UBX5 448 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NDOR1Q9UHB4 597 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SFMBT1Q9UHJ3 866 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 FBXL7Q9UJT9 491 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PNMA2Q9UL42 364 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MAPRE3Q9UPY8 281 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 YBX2Q9Y2T7 364 aaKnown RBP3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SIT1Q9Y3P8 196 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TRAF6Q9Y4K3 522 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 AFG3L2Q9Y4W6 797 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 HCFC2Q9Y5Z7 792 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PDE4DIPQ5VU43 2346 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CASP8AP2Q9UKL3 1982 aa3□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MYH2Q9UKX2 1941 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MAST3O60307 1309 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TRBV23OR9-2A0A075B6M9 112 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 A0A087X0B3 334 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TRBV23-1A0A0A0MS06 115 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CCDC189A1A4V9 331 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ZC3H12DA2A288 527 aaKnown RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 C7orf72A4D263 438 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NOTOA8MTQ0 251 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 C22orf46C9J442 243 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 GPAA1O43292 621 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CTNND1O60716 968 aaKnown RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PRDM1O75626 825 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 GLRX3O76003 335 aaKnown RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 GH2P01242 217 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 FGAP02671 866 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MPOP05164 745 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 LDHCP07864 332 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CYP2C8P10632 490 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 AKR1B1P15121 316 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CD53P19397 219 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CCND1P24385 295 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 HOXC12P31275 282 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 LTBRP36941 435 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 STAT3P40763 770 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ECE1P42892 770 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NCKAP1LP55160 1127 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 RPL11P62913 178 aaKnown RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 GSTO1P78417 241 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ZNF200P98182 395 aaPredicted RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MVKQ03426 396 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PTH1RQ03431 593 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MAP3K12Q12852 859 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 FAPQ12884 760 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SPP2Q13103 211 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NOGQ13253 232 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CRHR2Q13324 411 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CBX2Q14781 532 aaPredicted RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TTF1Q15361 905 aaPredicted RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ZNF124Q15973 351 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PKN1Q16512 942 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PLEKHN1Q494U1 663 aaPredicted RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MAP9Q49MG5 647 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 RNF219Q5W0B1 726 aaPredicted RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 OGFOD2Q6N063 350 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 KRBA2Q6ZNG9 492 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 RASGRP2Q7LDG7 609 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ARMC9Q7Z3E5 817 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 C11orf96Q7Z7L8 435 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 DDX42Q86XP3 938 aaKnown RBP eCLIP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NPLOC4Q8TAT6 608 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 COPS5Q92905 334 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TRMT2BQ96GJ1 504 aaKnown RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TMEM169Q96HH4 297 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 DHRS4Q9BTZ2 278 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MRPL4Q9BYD3 311 aaKnown RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ZNF341Q9BYN7 854 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ARHGAP39Q9C0H5 1083 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PDLIM7Q9NR12 457 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MCM9Q9NXL9 1143 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PI4KBQ9UBF8 816 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PPARGC1AQ9UBK2 798 aaKnown RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 FBXO9Q9UK97 447 aaPredicted RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 COA3Q9Y2R0 106 aaPredicted RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MRPS23Q9Y3D9 190 aaKnown RBP2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PPP2R3BQ9Y5P8 575 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms