RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 MAATS1Q7Z4T9 603 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 MREGQ8N565 214 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 TSEN2Q8NCE0 465 aaKnown RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 DDX1Q92499 740 aaKnown RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 CGRRF1Q99675 332 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 DDX47Q9H0S4 455 aaKnown RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 FAM204AQ9H8W3 233 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 UVRAGQ9P2Y5 699 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 GAS2O43903 313 aaKnown RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 C4BPAP04003 597 aaKnown RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 ITGA4P13612 1032 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 EFNA5P52803 228 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 BPIFB4P59827 614 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 ERVK-9P63128 1117 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 KCTD2Q14681 263 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 CLEC16AQ2KHT3 1053 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 TDRD10Q5VZ19 366 aaKnown RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 LMBRD2Q68DH5 695 aaPredicted RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 ACAD10Q6JQN1 1059 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 CRELD2Q6UXH1 353 aaPredicted RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 USP50Q70EL3 339 aaPredicted RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 EXOC8Q8IYI6 725 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 ZNF564Q8TBZ8 553 aaPredicted RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 BBXQ8WY36 941 aaPredicted RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 MMP19Q99542 508 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 ZSWIM1Q9BR11 485 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 NUP85Q9BW27 656 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 HAPLN2Q9GZV7 340 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 NOP56O00567 594 aaKnown RBP16.81■□□□□ 0.28
MKS1-204ENST00000537529 PGK2P07205 417 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 LMAN1P49257 510 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 MESDQ14696 234 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 IER5Q5VY09 327 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 ZPBP2Q6X784 338 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 ZNF677Q86XU0 584 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 TCP11Q8WWU5 503 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 GLG1Q92896 1179 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 ZBTB45Q96K62 511 aaPredicted RBP16.81■□□□□ 0.28
MKS1-204ENST00000537529 WNT8AQ9H1J5 351 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 BHMG1C9JSJ3 638 aaPredicted RBP16.81■□□□□ 0.28
MKS1-204ENST00000537529 GOLGA8KD6RF30 607 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 ATMINO43313 823 aaPredicted RBP16.81■□□□□ 0.28
MKS1-204ENST00000537529 LGR5O75473 907 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 FAM153BP0C7A2 387 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 HSPA6P17066 643 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 HLTFQ14527 1009 aaKnown RBP eCLIP16.81■□□□□ 0.28
MKS1-204ENST00000537529 FAM153CQ494X1 144 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 CELF3Q5SZQ8 465 aaKnown RBP16.81■□□□□ 0.28
MKS1-204ENST00000537529 C9orf131Q5VYM1 1079 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 MOB2Q70IA6 237 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
MKS1-204ENST00000537529 RIN2Q8WYP3 895 aaPredicted RBP16.81■□□□□ 0.28
MKS1-204ENST00000537529 ALG3Q92685 438 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 ELMO3Q96BJ8 720 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 FGD4Q96M96 766 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 GPR20Q99678 358 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 TXNRD2Q9NNW7 524 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 RBPJLQ9UBG7 517 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 FAM153AQ9UHL3 310 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 PRDM4Q9UKN5 801 aa16.81■□□□□ 0.28
MKS1-204ENST00000537529 ADGRA2Q96PE1 1338 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 DNAJC25-GNG10A0A024R161 153 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 SOCS7O14512 581 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 ARIH2O95376 493 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 COMTP21964 271 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 GUCY2FP51841 1108 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 WNT7BP56706 349 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 PTENP60484 403 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 PRPF31Q8WWY3 499 aaKnown RBP16.8■□□□□ 0.28
MKS1-204ENST00000537529 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
MKS1-204ENST00000537529 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 TRIM11Q96F44 468 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 FAM84AQ96KN4 292 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 SH3GL2Q99962 352 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 MRPL4Q9BYD3 311 aaKnown RBP16.8■□□□□ 0.28
MKS1-204ENST00000537529 MROH8Q9H579 483 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 TRPC6Q9Y210 931 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 PCDHB2Q9Y5E7 798 aa16.8■□□□□ 0.28
MKS1-204ENST00000537529 ERICH4A6NGS2 130 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 VNN1O95497 513 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 ZNF211Q13398 564 aaPredicted RBP16.79■□□□□ 0.28
MKS1-204ENST00000537529 MOGSQ13724 837 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 CFAP58Q5T655 872 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 SEL1L2Q5TEA6 688 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 PLPPR4Q7Z2D5 763 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 ARMC9Q7Z3E5 817 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 ZBTB8OSQ8IWT0 167 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 ATP8B4Q8TF62 1192 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 AMACRQ9UHK6 382 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 PTPRJQ12913 1337 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 LOC102724159A0A0B4J2E5 919 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 SPOPO43791 374 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 GRIN3BO60391 1043 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 EDN1P05305 212 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 CTNNA2P26232 953 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 AP3M2P53677 418 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 PPFIA1Q13136 1202 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 CUL2Q13617 745 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 MXD4Q14582 209 aaPredicted RBP16.79■□□□□ 0.28
MKS1-204ENST00000537529 PWP2Q15269 919 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms