RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 PSTPIP2Q9H939 334 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 RNPEPL1Q9HAU8 725 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 TUFT1Q9NNX1 390 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 ZDHHC18Q9NUE0 388 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 SLC5A4Q9NY91 659 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.22□□□□□ -1.41
CHD4-206ENST00000536999 APEX2Q9UBZ4 518 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 LGALS13Q9UHV8 139 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 LNPEPQ9UIQ6 1025 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 SALL4Q9UJQ4 1053 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 PNMA2Q9UL42 364 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 NENFQ9UMX5 172 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 MINPP1Q9UNW1 487 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 LRCH1Q9Y2L9 728 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 MYH6P13533 1939 aa6.22□□□□□ -1.41
CHD4-206ENST00000536999 MYH3P11055 1940 aa6.21□□□□□ -1.41
CHD4-206ENST00000536999 PLIN4Q96Q06 1357 aa6.21□□□□□ -1.41
CHD4-206ENST00000536999 A0A1W2PRG0 241 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 TLDC2A0PJX2 215 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 MAGEA13PA6NCF6 341 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 FAM47DPA6NHR8 397 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 A6NHS1 94 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 F8W031 263 aaPredicted RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 PRPF4O43172 522 aaKnown RBP eCLIP6.21□□□□□ -1.421e-7■□□□□ 10.6
CHD4-206ENST00000536999 EXOC3O60645 756 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 SMNDC1O75940 238 aaKnown RBP eCLIP6.21□□□□□ -1.42
CHD4-206ENST00000536999 NTSR2O95665 410 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 TTC4O95801 387 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 OAS1P00973 400 aaKnown RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 NR3C1P04150 777 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 GJB1P08034 283 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ZBTB48P10074 688 aaPredicted RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 MARK3P27448 753 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 PHBP35232 272 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 VHLP40337 213 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 POLGP54098 1239 aaPredicted RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 MXRA7P84157 204 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 XIAPP98170 497 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ARHGAP4P98171 946 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ARID5AQ03989 594 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 CDK18Q07002 472 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 KLRC3Q07444 240 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 PTP4A2Q12974 167 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 PRPF4BQ13523 1007 aaKnown RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 MAP7Q14244 749 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 SLC29A2Q14542 456 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 KIF22Q14807 665 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 E2F5Q15329 346 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 EPHA7Q15375 998 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 CCDC6Q16204 474 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 Q4G0T1 1027 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 SLC45A4Q5BKX6 768 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 FAM47AQ5JRC9 791 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 TJAP1Q5JTD0 557 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ANKRD20A2Q5SQ80 823 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ANKRD20A1Q5TYW2 823 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ANKRD20A3Q5VUR7 823 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 DAB2IPQ5VWQ8 1189 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 MIS18BP1Q6P0N0 1132 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 CCDC174Q6PII3 467 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ZNF365Q70YC5 407 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ZNF467Q7Z7K2 595 aaPredicted RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 ZNF677Q86XU0 584 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 FAM186BQ8IYM0 893 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 SLC30A5Q8TAD4 765 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ZNF483Q8TF39 744 aaPredicted RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 STK32AQ8WU08 396 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 U2AF1L4Q8WU68 220 aaKnown RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 SCFD1Q8WVM8 642 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 GPKOWQ92917 476 aaPredicted RBP eCLIP6.21□□□□□ -1.42
CHD4-206ENST00000536999 STMN2Q93045 179 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 SLC10A4Q96EP9 437 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 MBOAT7Q96N66 472 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 OLFM3Q96PB7 478 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 PRMT1Q99873 361 aaKnown RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 ZSWIM1Q9BR11 485 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 SIKE1Q9BRV8 207 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 AP1M1Q9BXS5 423 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 UBE2OQ9C0C9 1292 aaKnown RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 DHX36Q9H2U1 1008 aaKnown RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 PAPOLBQ9NRJ5 636 aaKnown RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.21□□□□□ -1.42
CHD4-206ENST00000536999 ETAA1Q9NY74 926 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 GCNT4Q9P109 453 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 BCAP29Q9UHQ4 241 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 SLC24A2Q9UI40 661 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ZMYND8Q9ULU4 1186 aaPredicted RBP6.21□□□□□ -1.42
CHD4-206ENST00000536999 SORCS3Q9UPU3 1222 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 PCDHA3Q9Y5H8 950 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 PCDHA2Q9Y5H9 948 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 TACC3Q9Y6A5 838 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 SLC4A7Q9Y6M7 1214 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 NCOR1O75376 2440 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 FRMPD4Q14CM0 1322 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 ADGRA3Q8IWK6 1321 aa6.21□□□□□ -1.42
CHD4-206ENST00000536999 hCG_1642624A0A1W2PR95 340 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 PP2D1A8MPX8 630 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 TCP11X1B4DZS4 312 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 F8W8V4 182 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 WNT7AO00755 349 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms