RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 OSGEPQ9NPF4 335 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 AVENQ9NQS1 362 aaPredicted RBP14.58□□□□□ -0.08
SMG6-203ENST00000536871 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.58□□□□□ -0.08
SMG6-203ENST00000536871 LCMT1Q9UIC8 334 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 ADGRA2Q96PE1 1338 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 WDR81Q562E7 1941 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 HLA-DRAP01903 254 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 CHRNB2P17787 502 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 DNA2P51530 1060 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 ERVK-9P63128 1117 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 POU5F1BQ06416 359 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 FSTL1Q12841 308 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 BIRC3Q13489 604 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 CAPSQ13938 189 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 MAPK6Q16659 721 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 GPAT2Q6NUI2 795 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 CCDC62Q6P9F0 684 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 WDR49Q8IV35 697 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 POP1Q99575 1024 aaKnown RBP14.57□□□□□ -0.08
SMG6-203ENST00000536871 EFCC1Q9HA90 598 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 SUGCTQ9HAC7 445 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 GOLGA6BA6NDN3 693 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 SOCS7O14512 581 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 DDX3YO15523 660 aaKnown RBP14.57□□□□□ -0.08
SMG6-203ENST00000536871 STRNO43815 780 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 GBP1P32455 592 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 MYH9P35579 1960 aaKnown RBP14.57□□□□□ -0.08
SMG6-203ENST00000536871 NLRP11P59045 1033 aaKnown RBP14.57□□□□□ -0.08
SMG6-203ENST00000536871 LAMC2Q13753 1193 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 CLEC16AQ2KHT3 1053 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 SND1Q7KZF4 910 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMG6-203ENST00000536871 ZNF467Q7Z7K2 595 aaPredicted RBP14.57□□□□□ -0.08
SMG6-203ENST00000536871 SLC47A2Q86VL8 602 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 BRSK2Q8IWQ3 736 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 EFCAB13Q8IY85 973 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 HDAC7Q8WUI4 952 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 KAT5Q92993 513 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 ARHGEF26Q96DR7 871 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 SLC10A4Q96EP9 437 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 FAXDC2Q96IV6 333 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 VCPIP1Q96JH7 1222 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 SPATA33Q96N06 139 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 RUFY1Q96T51 708 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 TARS2Q9BW92 718 aaKnown RBP14.57□□□□□ -0.08
SMG6-203ENST00000536871 NFKBIZQ9BYH8 718 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 RAB17Q9H0T7 212 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 TAF1DQ9H5J8 278 aaPredicted RBP14.57□□□□□ -0.08
SMG6-203ENST00000536871 EPB41L5Q9HCM4 733 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 TAS2R14Q9NYV8 317 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 EHD2Q9NZN4 543 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 TELO2Q9Y4R8 837 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 ALG6Q9Y672 507 aa14.57□□□□□ -0.08
SMG6-203ENST00000536871 POLR3GO15318 223 aaPredicted RBP14.56□□□□□ -0.08
SMG6-203ENST00000536871 HSF2BPO75031 334 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 CETPP11597 493 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 KRT5P13647 590 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 GCLCP48506 637 aaPredicted RBP14.56□□□□□ -0.08
SMG6-203ENST00000536871 FKBP1BP68106 108 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 GUCY2DQ02846 1103 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 LY6KQ17RY6 165 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 CRELD2Q6UXH1 353 aaPredicted RBP14.56□□□□□ -0.08
SMG6-203ENST00000536871 PRPF31Q8WWY3 499 aaKnown RBP14.56□□□□□ -0.08
SMG6-203ENST00000536871 DDX1Q92499 740 aaKnown RBP14.56□□□□□ -0.08
SMG6-203ENST00000536871 PCDHB18PQ96TA0 734 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 CCDC113Q9H0I3 377 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 VTA1Q9NP79 307 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 TOPORSQ9NS56 1045 aaPredicted RBP14.56□□□□□ -0.08
SMG6-203ENST00000536871 SMARCAL1Q9NZC9 954 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 CNTN6Q9UQ52 1028 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 SIP14410 1827 aa14.56□□□□□ -0.08
SMG6-203ENST00000536871 POLR2AP24928 1970 aaKnown RBP14.55□□□□□ -0.08
SMG6-203ENST00000536871 GLTPD2A6NH11 291 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 A6NNZ2 444 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 GOLGA8KD6RF30 607 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 H3BQF6 201 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 OGTO15294 1046 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 SART1O43290 800 aaKnown RBP14.55□□□□□ -0.08
SMG6-203ENST00000536871 SORBS3O60504 671 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 ZMYND10O75800 440 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 MMEP08473 750 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 CTNNA2P26232 953 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 SLC1A1P43005 524 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 SLC7A5Q01650 507 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 MCL1Q07820 350 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 CUL2Q13617 745 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 DHX34Q14147 1143 aaKnown RBP14.55□□□□□ -0.08
SMG6-203ENST00000536871 TUBB8Q3ZCM7 444 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 ZNF484Q5JVG2 852 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 TDRD10Q5VZ19 366 aaKnown RBP14.55□□□□□ -0.08
SMG6-203ENST00000536871 PALB2Q86YC2 1186 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 GPRC5AQ8NFJ5 357 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 ZNF564Q8TBZ8 553 aaPredicted RBP14.55□□□□□ -0.08
SMG6-203ENST00000536871 ZNF516Q92618 1163 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 TATDN2Q93075 761 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 ZNF653Q96CK0 615 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 LRRC45Q96CN5 670 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 RNPC3Q96LT9 517 aaKnown RBP14.55□□□□□ -0.08
SMG6-203ENST00000536871 FGD4Q96M96 766 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 TXNRD2Q9NNW7 524 aa14.55□□□□□ -0.08
SMG6-203ENST00000536871 FAM114A2Q9NRY5 505 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms