RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 BAG6P46379 1132 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 CACNB3P54284 484 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 CCDC6Q16204 474 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 SHROOM1Q2M3G4 852 aaPredicted RBP16.65■□□□□ 0.26
CHFR-213ENST00000536843 CCDC137Q6PK04 289 aaKnown RBP16.65■□□□□ 0.26
CHFR-213ENST00000536843 KCNK18Q7Z418 384 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 ZC3H18Q86VM9 953 aaKnown RBP16.65■□□□□ 0.26
CHFR-213ENST00000536843 LNX1Q8TBB1 728 aaPredicted RBP16.65■□□□□ 0.26
CHFR-213ENST00000536843 SNX29Q8TEQ0 813 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 NRG4Q8WWG1 115 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 GJA10Q969M2 543 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 FGFBP2Q9BYJ0 223 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 OCEL1Q9H607 264 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 METTL14Q9HCE5 456 aaKnown RBP16.65■□□□□ 0.26
CHFR-213ENST00000536843 DNAAF2Q9NVR5 837 aaKnown RBP16.65■□□□□ 0.26
CHFR-213ENST00000536843 LGALS13Q9UHV8 139 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 PCDHA2Q9Y5H9 948 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 ACTL7BQ9Y614 415 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 CETN3O15182 167 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 CLK2P49760 499 aaKnown RBP16.65■□□□□ 0.26
CHFR-213ENST00000536843 IL9RQ01113 521 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 SLC15A2Q16348 729 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 CYP1B1Q16678 543 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 STK32BQ9NY57 414 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 IGSF9BQ9UPX0 1349 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 ANKRD63C9JTQ0 380 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 ZBTB5O15062 677 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 RAD21O60216 631 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 TCP10Q12799 353 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 CNPY1Q3B7I2 92 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 GPATCH4Q5T3I0 446 aaKnown RBP16.64■□□□□ 0.25
CHFR-213ENST00000536843 LRRC74BQ6ZQY2 392 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 FRMD5Q7Z6J6 570 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 CCDC25Q86WR0 208 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 NELFCDQ8IXH7 590 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 NR1H4Q96RI1 486 aaPredicted RBP16.64■□□□□ 0.25
CHFR-213ENST00000536843 HAPLN3Q96S86 360 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 DHX36Q9H2U1 1008 aaKnown RBP16.64■□□□□ 0.25
CHFR-213ENST00000536843 DNAJC18Q9H819 358 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 SIX2Q9NPC8 291 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 AAASQ9NRG9 546 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 DDX25Q9UHL0 483 aaKnown RBP16.64■□□□□ 0.25
CHFR-213ENST00000536843 AJAP1Q9UKB5 411 aaPredicted RBP16.64■□□□□ 0.25
CHFR-213ENST00000536843 ADAMTSL1Q8N6G6 1762 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 ACSL3O95573 720 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 LMNB1P20700 586 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 SESN3P58005 492 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 EPHA7Q15375 998 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 ECM1Q16610 540 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 KRT79Q5XKE5 535 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 ZNF449Q6P9G9 518 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 RGS9BPQ6ZS82 235 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 FAM47EQ6ZV65 393 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 MIPOL1Q8TD10 442 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 CTNNBL1Q8WYA6 563 aaPredicted RBP16.64■□□□□ 0.25
CHFR-213ENST00000536843 HAS1Q92839 578 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 SPATA16Q9BXB7 569 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 PSTPIP2Q9H939 334 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 PCDHGA4Q9Y5G9 962 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 PASKQ96RG2 1323 aa16.64■□□□□ 0.25
CHFR-213ENST00000536843 MIF4GDA9UHW6 222 aaKnown RBP16.63■□□□□ 0.25
CHFR-213ENST00000536843 MMP10P09238 476 aa16.63■□□□□ 0.25
CHFR-213ENST00000536843 SLC34A1Q06495 639 aa16.63■□□□□ 0.25
CHFR-213ENST00000536843 MCL1Q07820 350 aa16.63■□□□□ 0.25
CHFR-213ENST00000536843 AP1B1Q10567 949 aa16.63■□□□□ 0.25
CHFR-213ENST00000536843 RCN1Q15293 331 aa16.63■□□□□ 0.25
CHFR-213ENST00000536843 ZDHHC14Q8IZN3 488 aa16.63■□□□□ 0.25
CHFR-213ENST00000536843 SCFD1Q8WVM8 642 aa16.63■□□□□ 0.25
CHFR-213ENST00000536843 MASTLQ96GX5 879 aa16.63■□□□□ 0.25
CHFR-213ENST00000536843 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
CHFR-213ENST00000536843 LARSQ9P2J5 1176 aaKnown RBP16.63■□□□□ 0.25
CHFR-213ENST00000536843 QSER1Q2KHR3 1735 aa16.63■□□□□ 0.25
CHFR-213ENST00000536843 CBX6O95503 412 aa16.62■□□□□ 0.25
CHFR-213ENST00000536843 SH3BGRP55822 239 aaPredicted RBP16.62■□□□□ 0.25
CHFR-213ENST00000536843 CALCOCO2Q13137 446 aa16.62■□□□□ 0.25
CHFR-213ENST00000536843 KIAA0825Q8IV33 1275 aa16.62■□□□□ 0.25
CHFR-213ENST00000536843 SAR1AQ9NR31 198 aa16.62■□□□□ 0.25
CHFR-213ENST00000536843 DDX43Q9NXZ2 648 aaKnown RBP16.62■□□□□ 0.25
CHFR-213ENST00000536843 TMOD4Q9NZQ9 345 aa16.62■□□□□ 0.25
CHFR-213ENST00000536843 PHTF1Q9UMS5 762 aa16.62■□□□□ 0.25
CHFR-213ENST00000536843 FOXO6A8MYZ6 492 aa16.62■□□□□ 0.25
CHFR-213ENST00000536843 COILP38432 576 aaPredicted RBP16.62■□□□□ 0.25
CHFR-213ENST00000536843 HADHBP55084 474 aaKnown RBP16.62■□□□□ 0.25
CHFR-213ENST00000536843 ZDHHC15Q96MV8 337 aa16.62■□□□□ 0.25
CHFR-213ENST00000536843 GMEB1Q9Y692 573 aa16.62■□□□□ 0.25
CHFR-213ENST00000536843 COMMD3-BMI1R4GMX3 469 aa16.62■□□□□ 0.25
CHFR-213ENST00000536843 DDTLA6NHG4 134 aaPredicted RBP16.61■□□□□ 0.25
CHFR-213ENST00000536843 MARCH6O60337 910 aa16.61■□□□□ 0.25
CHFR-213ENST00000536843 TTC4O95801 387 aa16.61■□□□□ 0.25
CHFR-213ENST00000536843 EEF2P13639 858 aaKnown RBP16.61■□□□□ 0.25
CHFR-213ENST00000536843 CDR2Q01850 454 aa16.61■□□□□ 0.25
CHFR-213ENST00000536843 LSAMPQ13449 338 aa16.61■□□□□ 0.25
CHFR-213ENST00000536843 AADACL2Q6P093 401 aa16.61■□□□□ 0.25
CHFR-213ENST00000536843 RFWD3Q6PCD5 774 aa16.61■□□□□ 0.25
CHFR-213ENST00000536843 CCDC65Q8IXS2 484 aa16.61■□□□□ 0.25
CHFR-213ENST00000536843 CYP4X1Q8N118 509 aa16.61■□□□□ 0.25
CHFR-213ENST00000536843 PPFIBP2Q8ND30 876 aa16.61■□□□□ 0.25
CHFR-213ENST00000536843 C10orf82Q8WW14 230 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms