RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ZNF131P52739 623 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 NCKAP1LP55160 1127 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 GLRA4Q5JXX5 417 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 KIAA0319Q5VV43 1072 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 APBB1IPQ7Z5R6 666 aaPredicted RBP19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 TMEM87AQ8NBN3 555 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 KCNN1Q92952 543 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ZBTB45Q96K62 511 aaPredicted RBP19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 POP1Q99575 1024 aaKnown RBP19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CHST7Q9NS84 486 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CDH22Q9UJ99 828 aa19.58■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ME1P48163 572 aa19.57■□□□□ 0.72
TNFRSF1A-209ENST00000536717 GLUD2P49448 558 aa19.57■□□□□ 0.72
TNFRSF1A-209ENST00000536717 DSG1Q02413 1049 aa19.57■□□□□ 0.72
TNFRSF1A-209ENST00000536717 STRN3Q13033 797 aa19.57■□□□□ 0.72
TNFRSF1A-209ENST00000536717 HSP90AA2PQ14568 343 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF1A-209ENST00000536717 MPZL3Q6UWV2 235 aa19.57■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ZBTB33Q86T24 672 aa19.57■□□□□ 0.72
TNFRSF1A-209ENST00000536717 LEO1Q8WVC0 666 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF1A-209ENST00000536717 B3GALT6Q96L58 329 aa19.57■□□□□ 0.72
TNFRSF1A-209ENST00000536717 PPP1R10Q96QC0 940 aaKnown RBP19.57■□□□□ 0.72
TNFRSF1A-209ENST00000536717 PI4K2BG5E9Z4 385 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 MCF2P10911 925 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 CLCN4P51793 760 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 OSTNP61366 133 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 CBX2Q14781 532 aaPredicted RBP19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ALKAL1Q6UXT8 129 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 HAUS6Q7Z4H7 955 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 PPFIBP1Q86W92 1011 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 FIZ1Q96SL8 496 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 PHF7Q9BWX1 381 aaPredicted RBP19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 EMILIN2Q9BXX0 1053 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 PARVGQ9HBI0 331 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ANK1P16157 1881 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 TOM1L1O75674 476 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 FAM13AO94988 1023 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 KIF4AO95239 1232 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 KLRC2P26717 231 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 TPRNQ4KMQ1 711 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 XKR4Q5GH76 650 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ZPBP2Q6X784 338 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 MYCT1Q8N699 235 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 C12orf76Q8N812 135 aaPredicted RBP19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 HASPINQ8TF76 798 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 TCHPQ9BT92 498 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 CCDC94Q9BW85 323 aaPredicted RBP19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 RXFP1Q9HBX9 757 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 STK17AQ9UEE5 414 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 CCDC39Q9UFE4 941 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 SSX2IPQ9Y2D8 614 aa19.56■□□□□ 0.72
TNFRSF1A-209ENST00000536717 LOC730098B7Z3J9 87 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 H0YCG3 227 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 TEX28O15482 410 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 MEFVO15553 781 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 CUTAO60888 179 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 TADA2AO75478 443 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 USP41Q3LFD5 358 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 KANK3Q6NY19 840 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 FEZF2Q8TBJ5 459 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 HAPLN2Q9GZV7 340 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ADAM7Q9H2U9 754 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 TOPORSQ9NS56 1045 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 DZANK1Q9NVP4 752 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ANKFY1Q9P2R3 1169 aa19.55■□□□□ 0.72
TNFRSF1A-209ENST00000536717 SF3B1O75533 1304 aaKnown RBP eCLIP19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 TECTAO75443 2155 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 A0A087X0B3 334 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 SMIM28A0A1B0GU29 152 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 TRAK2O60296 914 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 KRT18P05783 430 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 HARSP12081 509 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 IGFBP6P24592 240 aaPredicted RBP19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 YARSP54577 528 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ITIH3Q06033 890 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 NOLC1Q14978 699 aaKnown RBP eCLIP19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 RARS2Q5T160 578 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 KIAA1841Q6NSI8 718 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 GPR65Q8IYL9 337 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 SNX27Q96L92 541 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ZMAT2Q96NC0 199 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ACAP3Q96P50 834 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 C1QTNF1Q9BXJ1 281 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 GOLGA2P5Q9HBQ8 144 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 GDPD2Q9HCC8 539 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 C11orf16Q9NQ32 467 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 PCDHA7Q9UN72 937 aa19.54■□□□□ 0.72
TNFRSF1A-209ENST00000536717 K7ENM7 598 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ADH1AP07327 375 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 TXLNAP40222 546 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 SOX4Q06945 474 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 MCL1Q07820 350 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 SEZ6Q53EL9 994 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 RTP2Q5QGT7 225 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 RRAGBQ5VZM2 374 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 CES5AQ6NT32 575 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 RNF135Q8IUD6 432 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 FBXL18Q96ME1 805 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 ZHX3Q9H4I2 956 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 DOCK8Q8NF50 2099 aa19.53■□□□□ 0.72
TNFRSF1A-209ENST00000536717 CLDN3O15551 220 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms