RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 NDST4Q9H3R1 872 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
CDCA3-206ENST00000536241 RNF19AQ9NV58 838 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 KLK14Q9P0G3 267 aa12.51□□□□□ -0.41
CDCA3-206ENST00000536241 A0A1B0GTH6 734 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 TTC26A0AVF1 554 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 MEIS3P2A8K0S8 358 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 C9IYK1 514 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 ADCY5O95622 1261 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 TPM2P07951 284 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 ACRP10323 421 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 ITGA4P13612 1032 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 SYN1P17600 705 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 TNNI1P19237 187 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 RFC2P35250 354 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
CDCA3-206ENST00000536241 FAM189BP81408 668 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 PPP3CAQ08209 521 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 PTPN21Q16825 1174 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 FILIP1LQ4L180 1135 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 ECHDC2Q86YB7 292 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 RNF169Q8NCN4 708 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 LINC01599Q8WXQ3 324 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 BADQ92934 168 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 FAM84AQ96KN4 292 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
CDCA3-206ENST00000536241 TOPORSQ9NS56 1045 aaPredicted RBP12.5□□□□□ -0.41
CDCA3-206ENST00000536241 ALPK3Q96L96 1907 aa12.5□□□□□ -0.41
CDCA3-206ENST00000536241 RECQL4O94761 1208 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 AFPP02771 609 aaKnown RBP12.49□□□□□ -0.41
CDCA3-206ENST00000536241 SKIP12755 728 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 GCLMP48507 274 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 RAB27AP51159 221 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 ZNF75DP51815 510 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 POU5F1Q01860 360 aaKnown RBP12.49□□□□□ -0.41
CDCA3-206ENST00000536241 UBXN1Q04323 297 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 PPP2R3AQ06190 1150 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 IKBKEQ14164 716 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 SURF1Q15526 300 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 ALKAL1Q6UXT8 129 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 AGMOQ6ZNB7 445 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
CDCA3-206ENST00000536241 ASB7Q9H672 318 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 PLEKHA5Q9HAU0 1116 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 INTS13Q9NVM9 706 aa12.49□□□□□ -0.41
CDCA3-206ENST00000536241 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.48□□□□□ -0.41
CDCA3-206ENST00000536241 LGALS16A8MUM7 142 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 CBFA2T2O43439 604 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 IL18RAPO95256 599 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 ATF7P17544 494 aaPredicted RBP12.48□□□□□ -0.41
CDCA3-206ENST00000536241 FMO5P49326 533 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 CLDN10P78369 228 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 CBWD6Q4V339 395 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 CBWD3Q5JTY5 395 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 CBWD5Q5RIA9 395 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 JADE1Q6IE81 842 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 CNKSR3Q6P9H4 555 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 SV2AQ7L0J3 742 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 C16orf59Q7L2K0 433 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 USP37Q86T82 979 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 CD302Q8IX05 232 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 HACE1Q8IYU2 909 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 OR5B17Q8NGF7 314 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 C1orf112Q9NSG2 853 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 ZMYND8Q9ULU4 1186 aaPredicted RBP12.48□□□□□ -0.41
CDCA3-206ENST00000536241 TRIP11Q15643 1979 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 PTPRJQ12913 1337 aa12.48□□□□□ -0.41
CDCA3-206ENST00000536241 EOMESO95936 686 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 C4BPAP04003 597 aaKnown RBP12.47□□□□□ -0.41
CDCA3-206ENST00000536241 NFICP08651 508 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 AFF1P51825 1210 aaKnown RBP12.47□□□□□ -0.41
CDCA3-206ENST00000536241 TFAMQ00059 246 aaKnown RBP12.47□□□□□ -0.41
CDCA3-206ENST00000536241 ENPEPQ07075 957 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 KCNMA1Q12791 1236 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 XKR4Q5GH76 650 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 SCARA3Q6AZY7 606 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDCA3-206ENST00000536241 FAM43BQ6ZT52 329 aaPredicted RBP12.47□□□□□ -0.41
CDCA3-206ENST00000536241 ZNF598Q86UK7 904 aaKnown RBP12.47□□□□□ -0.41
CDCA3-206ENST00000536241 EFCAB13Q8IY85 973 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 PGBD4Q96DM1 585 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 SNX27Q96L92 541 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 ZFP42Q96MM3 310 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 ZMAT2Q96NC0 199 aaKnown RBP12.47□□□□□ -0.41
CDCA3-206ENST00000536241 GAD1Q99259 594 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 CGRRF1Q99675 332 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 CRACR2AQ9BSW2 395 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 TMEM117Q9H0C3 514 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 IL23AQ9NPF7 189 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 MIOSQ9NXC5 875 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 GIT1Q9Y2X7 761 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 PCDHB7Q9Y5E2 793 aa12.47□□□□□ -0.41
CDCA3-206ENST00000536241 SMIM28A0A1B0GU29 152 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 STX10O60499 249 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 LRRN2O75325 713 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 CST3P01034 146 aaPredicted RBP12.46□□□□□ -0.41
CDCA3-206ENST00000536241 GTF2H1P32780 548 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 FPGSQ05932 587 aa12.46□□□□□ -0.41
CDCA3-206ENST00000536241 DUOXA2Q1HG44 320 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms