RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 DIRC3C9JPN6 131 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 LEFTY2O00292 366 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 SPATA31D3P0C874 917 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 GUCY1A2P33402 732 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 PCBP2Q15366 365 aaKnown RBP eCLIP6.8□□□□□ -1.32
PRKDC-205ENST00000535375 ATP2B3Q16720 1220 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 EFCAB2Q5VUJ9 269 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 SPATA31D4Q6ZUB0 917 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 GDF7Q7Z4P5 450 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 NEU4Q8WWR8 484 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-205ENST00000535375 CASKIN2Q8WXE0 1202 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 SLC46A2Q9BY10 475 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 REXO4Q9GZR2 422 aaKnown RBP6.8□□□□□ -1.32
PRKDC-205ENST00000535375 NOP58Q9Y2X3 529 aaKnown RBP6.8□□□□□ -1.32
PRKDC-205ENST00000535375 SPEF1Q9Y4P9 236 aa6.8□□□□□ -1.32
PRKDC-205ENST00000535375 RNASET2O00584 256 aaKnown RBP6.79□□□□□ -1.32
PRKDC-205ENST00000535375 GPR32O75388 356 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 POMCP01189 267 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 C5AR1P21730 350 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 ANAPC15P60006 121 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 KIF23Q02241 960 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-205ENST00000535375 FHL2Q14192 279 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 CSRP2Q16527 193 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 TIGD2Q4W5G0 525 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 MED25Q71SY5 747 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 DRC7Q8IY82 874 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 OR2I1PQ8NGU4 316 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 HDAC10Q969S8 669 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 SORCS2Q96PQ0 1159 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 FZD1Q9UP38 647 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 SIK3Q9Y2K2 1263 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 ACTL7AQ9Y615 435 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 ATRNL1Q5VV63 1379 aa6.79□□□□□ -1.32
PRKDC-205ENST00000535375 DRGXA6NNA5 263 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 PCDHGA12O60330 932 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 HLA-DOAP06340 250 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 LAG3P18627 525 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 WASP42768 502 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 ALDH1A3P47895 512 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 SLC6A9P48067 706 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 KRT85P78386 507 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 CREMQ03060 361 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 KLF10Q13118 480 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 ZNF529Q6P280 563 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 RSPH3Q86UC2 560 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 PLXDC1Q8IUK5 500 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 SYT12Q8IV01 421 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 TEKT5Q96M29 485 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 ZNF768Q9H5H4 540 aaKnown RBP6.78□□□□□ -1.32
PRKDC-205ENST00000535375 TDP1Q9NUW8 608 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 GPRC5BQ9NZH0 403 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 TUBD1Q9UJT1 453 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 RUVBL1Q9Y265 456 aaKnown RBP6.78□□□□□ -1.32
PRKDC-205ENST00000535375 ATP11BQ9Y2G3 1177 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 USP15Q9Y4E8 981 aaPredicted RBP6.78□□□□□ -1.32
PRKDC-205ENST00000535375 PCDHGA9Q9Y5G4 932 aaKnown RBP6.78□□□□□ -1.32
PRKDC-205ENST00000535375 PCDHGA8Q9Y5G5 932 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 PCDHGA7Q9Y5G6 932 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 PCDHGA6Q9Y5G7 932 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 PCDHGA3Q9Y5H0 932 aa6.78□□□□□ -1.32
PRKDC-205ENST00000535375 MYBBP1AQ9BQG0 1328 aaKnown RBP6.77□□□□□ -1.32
PRKDC-205ENST00000535375 hCG_2014768A0A024R1R8 64 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 GAGE12BA1L429 117 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 AHRRA9YTQ3 701 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 SNUPNO95149 360 aaKnown RBP6.77□□□□□ -1.33
PRKDC-205ENST00000535375 ABHD16AO95870 558 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 ITGB1P05556 798 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 DDCP20711 480 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 FPR1P21462 350 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 CHN2P52757 468 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 PTTG1IPP53801 180 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 MXRA7P84157 204 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 PTPAQ15257 358 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 LY6G5CQ5SRR4 150 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 OTUD7BQ6GQQ9 843 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 KCNV1Q6PIU1 500 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 LENG9Q96B70 501 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 MRIQ9BWK5 157 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 SLC13A1Q9BZW2 595 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 PCED1AQ9H1Q7 454 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 AKIP1Q9NQ31 210 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 PCDHA13Q9Y5I0 950 aa6.77□□□□□ -1.33
PRKDC-205ENST00000535375 TNKSO95271 1327 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 PNPLA7Q6ZV29 1317 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 NCR1O76036 304 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 SLPIP03973 132 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 RPLP2P05387 115 aaKnown RBP6.76□□□□□ -1.33
PRKDC-205ENST00000535375 ALAS1P13196 640 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 ZSCAN20P17040 1043 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-205ENST00000535375 NCLP19338 710 aaKnown RBP6.76□□□□□ -1.33
PRKDC-205ENST00000535375 PCSK1P29120 753 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 HMGA2P52926 109 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 TGFB2P61812 414 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 UBXN2BQ14CS0 331 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 PPP4R3AQ6IN85 833 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 PROKR1Q8TCW9 393 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 ASPSCR1Q9BZE9 553 aa6.76□□□□□ -1.33
PRKDC-205ENST00000535375 ING1Q9UK53 422 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-205ENST00000535375 CHST2Q9Y4C5 530 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms