RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 TMEM173Q86WV6 379 aaPredicted RBP11.39□□□□□ -0.59
CSDE1-217ENST00000534699 NT5DC4Q86YG4 428 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 BACH2Q9BYV9 841 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 WDR6Q9NNW5 1121 aaKnown RBP11.39□□□□□ -0.59
CSDE1-217ENST00000534699 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
CSDE1-217ENST00000534699 PCDHGC5Q9Y5F6 944 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 CCDC169A6NNP5 214 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 E9PMD0 336 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 ZMYND10O75800 440 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 CLTAP09496 248 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 CLUL1Q15846 466 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 RARS2Q5T160 578 aaKnown RBP11.39□□□□□ -0.59
CSDE1-217ENST00000534699 SNX27Q96L92 541 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 CDT1Q9H211 546 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 CUEDC2Q9H467 287 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 SNTG2Q9NY99 539 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.39□□□□□ -0.597e-7■□□□□ 9.9
CSDE1-217ENST00000534699 MTRRQ9UBK8 725 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 FBXW11Q9UKB1 542 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 SRPRBQ9Y5M8 271 aaKnown RBP11.39□□□□□ -0.59
CSDE1-217ENST00000534699 KIAA0391O15091 583 aaKnown RBP11.38□□□□□ -0.59
CSDE1-217ENST00000534699 TEX28O15482 410 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 B4GALT3O60512 393 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 ZNF568Q3ZCX4 644 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 LLGL2Q6P1M3 1020 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 FBXL6Q8N531 539 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 LEMD2Q8NC56 503 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 TMEM161BQ8NDZ6 487 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 RAD54LQ92698 747 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 PRKD2Q9BZL6 878 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 BRWD1Q9NSI6 2320 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 VWA3AA6NCI4 1184 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 ABLIM1O14639 778 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 EPCAMP16422 314 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 LRPAP1P30533 357 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 PBX3P40426 434 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 NOLC1Q14978 699 aaKnown RBP eCLIP11.38□□□□□ -0.592e-7■□□□□ 10.8
CSDE1-217ENST00000534699 POSTNQ15063 836 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 TPGS2Q68CL5 300 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 SUGP1Q8IWZ8 645 aaKnown RBP11.38□□□□□ -0.59
CSDE1-217ENST00000534699 PYM1Q9BRP8 204 aaKnown RBP11.38□□□□□ -0.59
CSDE1-217ENST00000534699 RUSC1Q9BVN2 902 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 POMKQ9H5K3 350 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 HSFX1Q9UBD0 423 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 C2orf16Q68DN1 1984 aa11.38□□□□□ -0.59
CSDE1-217ENST00000534699 CLUHO75153 1309 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 XYLBO75191 536 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 AKAP5P24588 427 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 PTPN5P54829 565 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 UPP1Q16831 310 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 EEF1DP3Q658K8 133 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 ZFP42Q96MM3 310 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 APOL6Q9BWW8 343 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 MAGEF1Q9HAY2 307 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 PARVGQ9HBI0 331 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 MAN1C1Q9NR34 630 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 EXOC7Q9UPT5 735 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 PRG3Q9Y2Y8 225 aaPredicted RBP11.37□□□□□ -0.59
CSDE1-217ENST00000534699 DDIT3P35638 169 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 PSMD5Q16401 504 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 MAEAQ7L5Y9 396 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 APPL2Q8NEU8 664 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 SPATA18Q8TC71 538 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 KHSRPQ92945 711 aaKnown RBP eCLIP11.37□□□□□ -0.592e-7■■■■□ 20
CSDE1-217ENST00000534699 MUTYHQ9UIF7 546 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 HES2Q9Y543 173 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 STYXL1Q9Y6J8 313 aa11.37□□□□□ -0.59
CSDE1-217ENST00000534699 SMIM28A0A1B0GU29 152 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 K7ELQ4 463 aaPredicted RBP11.36□□□□□ -0.59
CSDE1-217ENST00000534699 FAM13AO94988 1023 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 CA8P35219 290 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 GTF2BQ00403 316 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 RSPO2Q6UXX9 243 aaPredicted RBP11.36□□□□□ -0.59
CSDE1-217ENST00000534699 CCDC73Q6ZRK6 1079 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 TAS1R3Q7RTX0 852 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 LNX1Q8TBB1 728 aaPredicted RBP11.36□□□□□ -0.59
CSDE1-217ENST00000534699 RIN2Q8WYP3 895 aaPredicted RBP11.36□□□□□ -0.59
CSDE1-217ENST00000534699 RPGRIP1Q96KN7 1286 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 ZNF396Q96N95 335 aaPredicted RBP11.36□□□□□ -0.59
CSDE1-217ENST00000534699 GPR62Q9BZJ7 368 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 UBQLN1Q9UMX0 589 aaKnown RBP11.36□□□□□ -0.59
CSDE1-217ENST00000534699 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 CLDN3O15551 220 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 CLCN5P51795 746 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 RESTQ13127 1097 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 MRPL58Q14197 206 aaKnown RBP11.36□□□□□ -0.59
CSDE1-217ENST00000534699 NBR1Q14596 966 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 PTPAQ15257 358 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 LIN9Q5TKA1 542 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 CNNM4Q6P4Q7 775 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 MTSS1LQ765P7 747 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 KRI1Q8N9T8 703 aaKnown RBP11.36□□□□□ -0.59
CSDE1-217ENST00000534699 KREMEN2Q8NCW0 462 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 LARP4BQ92615 738 aaKnown RBP11.36□□□□□ -0.59
CSDE1-217ENST00000534699 SUSD3Q96L08 255 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 ASB7Q9H672 318 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 PCDHB8Q9UN66 801 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 TRIP11Q15643 1979 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 VWA8A3KMH1 1905 aa11.36□□□□□ -0.59
CSDE1-217ENST00000534699 C2CD4DB7Z1M9 353 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms