RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 PCDHB6Q9Y5E3 794 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 VWA8A3KMH1 1905 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 CITO14578 2027 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 MYO15AQ9UKN7 3530 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 EDN1P05305 212 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 RFX1P22670 979 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 PRPHP41219 470 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 CLCN5P51795 746 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 YARSP54577 528 aaKnown RBP20.3■□□□□ 0.84
CTSB-233ENST00000534636 RABEP1Q15276 862 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 DTHD1Q6ZMT9 781 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 TMEM105Q8N8V8 129 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 ZNF707Q96C28 371 aaPredicted RBP20.3■□□□□ 0.84
CTSB-233ENST00000534636 UROC1Q96N76 676 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 KIF2CQ99661 725 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 CCDC94Q9BW85 323 aaPredicted RBP20.3■□□□□ 0.84
CTSB-233ENST00000534636 POLD4Q9HCU8 107 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 TOPORSQ9NS56 1045 aaPredicted RBP20.3■□□□□ 0.84
CTSB-233ENST00000534636 FAM86C1Q9NVL1 165 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.3■□□□□ 0.84
CTSB-233ENST00000534636 EPS15L1Q9UBC2 864 aa20.3■□□□□ 0.84
CTSB-233ENST00000534636 ZFHX2Q9C0A1 2572 aaPredicted RBP20.29■□□□□ 0.84
CTSB-233ENST00000534636 H0Y858 1186 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 N4BP1O75113 896 aaKnown RBP20.29■□□□□ 0.84
CTSB-233ENST00000534636 ZMYND10O75800 440 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 TOB1P50616 345 aaPredicted RBP20.29■□□□□ 0.84
CTSB-233ENST00000534636 PEX3P56589 373 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 ZNF568Q3ZCX4 644 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 C8orf34Q49A92 452 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 GLRA4Q5JXX5 417 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 NT5DC1Q5TFE4 455 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 LILRA6Q6PI73 481 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
CTSB-233ENST00000534636 NXPE3Q969Y0 559 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 MRPL4Q9BYD3 311 aaKnown RBP20.29■□□□□ 0.84
CTSB-233ENST00000534636 KMT5AQ9NQR1 393 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 FBXW11Q9UKB1 542 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 TNFSF13BQ9Y275 285 aa20.29■□□□□ 0.84
CTSB-233ENST00000534636 E9PMD0 336 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 TRAPPC3O43617 180 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 HIP1RO75146 1068 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 B3GAT3O94766 335 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 PAPLNO95428 1278 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 NPTX2P47972 431 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 ZRSR1Q15695 479 aaKnown RBP20.28■□□□□ 0.84
CTSB-233ENST00000534636 RILPL1Q5EBL4 403 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 PPM1LQ5SGD2 360 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 SIX5Q8N196 739 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 LNX1Q8TBB1 728 aaPredicted RBP20.28■□□□□ 0.84
CTSB-233ENST00000534636 MYADMQ96S97 322 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 TIPINQ9BVW5 301 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 C17orf75Q9HAS0 396 aa20.28■□□□□ 0.84
CTSB-233ENST00000534636 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
CTSB-233ENST00000534636 VPS13AQ96RL7 3174 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 PP2D1A8MPX8 630 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 H3BQV1 296 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 TMEM189-UBE2V1I3L0A0 370 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 XYLBO75191 536 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 C8AP07357 584 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 HNRNPA1P09651 372 aaKnown RBP eCLIP20.27■□□□□ 0.84
CTSB-233ENST00000534636 NAB2Q15742 525 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 PPP1R10Q96QC0 940 aaKnown RBP20.27■□□□□ 0.84
CTSB-233ENST00000534636 CLSTN3Q9BQT9 956 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 TMEM134Q9H6X4 195 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 UPF2Q9HAU5 1272 aaKnown RBP20.27■□□□□ 0.84
CTSB-233ENST00000534636 SLC38A7Q9NVC3 462 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 DOCK6Q96HP0 2047 aa20.27■□□□□ 0.84
CTSB-233ENST00000534636 FSHRP23945 695 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 GRM5P41594 1212 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 CLCNKBP51801 687 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 CWF19L1Q69YN2 538 aaKnown RBP20.26■□□□□ 0.83
CTSB-233ENST00000534636 DCLRE1AQ6PJP8 1040 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 CDK5RAP3Q96JB5 506 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 ACO2Q99798 780 aaKnown RBP20.26■□□□□ 0.83
CTSB-233ENST00000534636 RTP3Q9BQQ7 232 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 TCHPQ9BT92 498 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 RUSC1Q9BVN2 902 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 CDT1Q9H211 546 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 CXCL16Q9H2A7 254 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.26■□□□□ 0.83
CTSB-233ENST00000534636 ARHGAP28Q9P2N2 729 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 KCNG1Q9UIX4 513 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 POLIQ9UNA4 740 aa20.26■□□□□ 0.83
CTSB-233ENST00000534636 ZFP37Q9Y6Q3 630 aaPredicted RBP20.26■□□□□ 0.83
CTSB-233ENST00000534636 STK25O00506 426 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 NARSO43776 548 aaKnown RBP20.25■□□□□ 0.83
CTSB-233ENST00000534636 GFRA3O60609 400 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 CFHP08603 1231 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 SRFP11831 508 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 LAMP2P13473 410 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 AOC1P19801 751 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 CDC25AP30304 524 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 HOXA9P31269 272 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 OSTNP61366 133 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 STRN3Q13033 797 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 UPP1Q16831 310 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 RINT1Q6NUQ1 792 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 RSAD2Q8WXG1 361 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 WNT16Q9UBV4 365 aa20.25■□□□□ 0.83
CTSB-233ENST00000534636 CFAP54Q96N23 3096 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms