RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 MTMR6Q9Y217 621 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 PCDHB6Q9Y5E3 794 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 ZFP37Q9Y6Q3 630 aaPredicted RBP13.84□□□□□ -0.19
USF1-211ENST00000534633 NOTCH4Q99466 2003 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 KRBA1A5PL33 1030 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 PTGESO14684 152 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 RECQL4O94761 1208 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 THP07101 528 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 RPL17P18621 184 aaKnown RBP13.83□□□□□ -0.2
USF1-211ENST00000534633 RPA1P27694 616 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 TRAPPC10P48553 1259 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 ELAVL2Q12926 359 aaKnown RBP13.83□□□□□ -0.2
USF1-211ENST00000534633 PRPF4BQ13523 1007 aaKnown RBP13.83□□□□□ -0.2
USF1-211ENST00000534633 ANGPT1Q15389 498 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 TMEM132AQ24JP5 1023 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 PDXDC1Q6P996 788 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 PADI6Q6TGC4 694 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 PRSS55Q6UWB4 352 aaPredicted RBP13.83□□□□□ -0.2
USF1-211ENST00000534633 GET4Q7L5D6 327 aaPredicted RBP13.83□□□□□ -0.2
USF1-211ENST00000534633 ERMNQ8TAM6 284 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 HASPINQ8TF76 798 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 PIK3R5Q8WYR1 880 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 BSNDQ8WZ55 320 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 SNX27Q96L92 541 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 TTPALQ9BTX7 342 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 CCDC113Q9H0I3 377 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 SNTG2Q9NY99 539 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 CACNG4Q9UBN1 327 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 MYH11P35749 1972 aa13.83□□□□□ -0.2
USF1-211ENST00000534633 ARHGEF35A5YM69 484 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 CASTOR2A6NHX0 329 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 TTLL13PA6NNM8 815 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 ANHXE9PGG2 379 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 STK25O00506 426 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 ACKR2O00590 384 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 KIF4AO95239 1232 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 PRKCBP05771 671 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 HNRNPA1P09651 372 aaKnown RBP eCLIP13.82□□□□□ -0.2
USF1-211ENST00000534633 CYP11B2P19099 503 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 PDCP20941 246 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 MUTP22033 750 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 RFX1P22670 979 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 NAMPTP43490 491 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 RESTQ13127 1097 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 HTR4Q13639 388 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
USF1-211ENST00000534633 PPP2R5AQ15172 486 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 NAB2Q15742 525 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 PSMD5Q16401 504 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 TTC38Q5R3I4 469 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 LIN9Q5TKA1 542 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 FAM171A1Q5VUB5 890 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 CLSTN3Q9BQT9 956 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 SLC2A4RGQ9NR83 387 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 CA14Q9ULX7 337 aa13.82□□□□□ -0.2
USF1-211ENST00000534633 PDCD11Q14690 1871 aaKnown RBP13.82□□□□□ -0.2
USF1-211ENST00000534633 VPS37CA5D8V6 355 aaPredicted RBP13.81□□□□□ -0.2
USF1-211ENST00000534633 STX6O43752 255 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 OR52Z1P0C646 297 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 FSHRP23945 695 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 HOXA9P31269 272 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 PKP1Q13835 747 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 IL17AQ16552 155 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 DCAF4L1Q3SXM0 396 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 PHLDB3Q6NSJ2 640 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 FAM173BQ6P4H8 233 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 CEP57Q86XR8 500 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 DEPTORQ8TB45 409 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 LNX1Q8TBB1 728 aaPredicted RBP13.81□□□□□ -0.2
USF1-211ENST00000534633 GPR152Q8TDT2 470 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 TBC1D17Q9HA65 648 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 ARHGEF3Q9NR81 526 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.81□□□□□ -0.2
USF1-211ENST00000534633 NUMBLQ9Y6R0 609 aa13.81□□□□□ -0.2
USF1-211ENST00000534633 PATJQ8NI35 1801 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 TMEM189-UBE2V1I3L0A0 370 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 EDN1P05305 212 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 C8AP07357 584 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 POU2F2P09086 479 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 EFNA5P52803 228 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 PPM1LQ5SGD2 360 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 EEF1DP3Q658K8 133 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.8□□□□□ -0.2
USF1-211ENST00000534633 GRASPQ7Z6J2 395 aaPredicted RBP13.8□□□□□ -0.2
USF1-211ENST00000534633 KIFAP3Q92845 792 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 IFT74Q96LB3 600 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 CXCL16Q9H2A7 254 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 GVINP1Q7Z2Y8 2422 aa13.8□□□□□ -0.2
USF1-211ENST00000534633 CACNA1IQ9P0X4 2223 aa13.79□□□□□ -0.2
USF1-211ENST00000534633 XYLBO75191 536 aa13.79□□□□□ -0.2
USF1-211ENST00000534633 LIG1P18858 919 aa13.79□□□□□ -0.2
USF1-211ENST00000534633 FOXK2Q01167 660 aa13.79□□□□□ -0.2
USF1-211ENST00000534633 PTGDRQ13258 359 aa13.79□□□□□ -0.2
USF1-211ENST00000534633 RAB33AQ14088 237 aa13.79□□□□□ -0.2
USF1-211ENST00000534633 RILPL1Q5EBL4 403 aa13.79□□□□□ -0.2
USF1-211ENST00000534633 DCLRE1AQ6PJP8 1040 aa13.79□□□□□ -0.2
USF1-211ENST00000534633 MTSS1LQ765P7 747 aa13.79□□□□□ -0.2
USF1-211ENST00000534633 RTL10Q7L3V2 364 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms