RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 TPM2P07951 284 aa14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 ATF7P17544 494 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 RPL13P26373 211 aaKnown RBP14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 NCBP1Q09161 790 aaKnown RBP14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 SNRNP35Q16560 246 aaKnown RBP14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 TMC6Q7Z403 805 aa14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 TMCO2Q7Z6W1 182 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 FILIP1Q7Z7B0 1213 aa14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 GPD1LQ8N335 351 aa14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 CCDC51Q96ER9 411 aa14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 RNF39Q9H2S5 420 aa14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 RTN4Q9NQC3 1192 aaKnown RBP14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 CPSF3Q9UKF6 684 aaKnown RBP14.59□□□□□ -0.07
TRAPPC4-214ENST00000533632 GRXCR1A8MXD5 290 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 SOX1O00570 391 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 NRDCO43847 1150 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 EXTL3O43909 919 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 ACTN1P12814 892 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 IKBKEQ14164 716 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 KRT31Q15323 416 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 DCAF4L1Q3SXM0 396 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 SPECC1LQ69YQ0 1117 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 CRIPAKQ8N1N5 446 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 CNOT6LQ96LI5 555 aaKnown RBP14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 ADPGKQ9BRR6 497 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 TRAIPQ9BWF2 469 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 TSPYL2Q9H2G4 693 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 FAM105AQ9NUU6 356 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 IPPQ9Y573 584 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 PCDHB2Q9Y5E7 798 aa14.58□□□□□ -0.08
TRAPPC4-214ENST00000533632 C9IYK1 514 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 ENPP3O14638 875 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 SLC16A3O15427 465 aaKnown RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 ZNF500O60304 480 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 STAG3L1P0CL83 205 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 ENOX2Q16206 610 aaKnown RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 LRIT3Q3SXY7 679 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 LRRC8AQ8IWT6 810 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 FAM186BQ8IYM0 893 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 FAM84AQ96KN4 292 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 RGS18Q9NS28 235 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 INTS13Q9NVM9 706 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 SNTG2Q9NY99 539 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 A0A0U1RQF3 1178 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 ZBBXA8MT70 800 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 KIAA0391O15091 583 aaKnown RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 CXCL8P10145 99 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 ZSCAN20P17040 1043 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 AKAP5P24588 427 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 PSMC2P35998 433 aaKnown RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 GRM5P41594 1212 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 COPB1P53618 953 aaKnown RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 HABP4Q5JVS0 413 aaKnown RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 LPPQ93052 612 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 MKNK1Q9BUB5 465 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 TRIM6Q9C030 488 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 FRMD4BQ9Y2L6 1034 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 SLC4A7Q9Y6M7 1214 aa14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 FNDC1Q4ZHG4 1894 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC4-214ENST00000533632 ITIH6Q6UXX5 1313 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 GNA14O95837 355 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 MARSP56192 900 aaKnown RBP14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 DLG4P78352 724 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 CYP24A1Q07973 514 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 SLC10A6Q3KNW5 377 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 C1orf220Q5T0J3 134 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 ZNF598Q86UK7 904 aaKnown RBP14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 BRSK2Q8IWQ3 736 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 MFSD14AQ96MC6 490 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 APOL6Q9BWW8 343 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 FTHL17Q9BXU8 183 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 RBAKQ9NYW8 714 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 PTPRJQ12913 1337 aa14.56□□□□□ -0.08
TRAPPC4-214ENST00000533632 MAPK13O15264 365 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 EFCAB14O75071 495 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 ZNF623O75123 536 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 RECQL4O94761 1208 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 LDHAP00338 332 aaKnown RBP14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 EPB41P11171 864 aaKnown RBP14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 IBSPP21815 317 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 FAM189BP81408 668 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 CCDC40Q4G0X9 1142 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 AGMOQ6ZNB7 445 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 MRPL10Q7Z7H8 261 aaKnown RBP14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 ECHDC2Q86YB7 292 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 CREBRFQ8IUR6 639 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 TRIM59Q8IWR1 403 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 CACTINQ8WUQ7 758 aaKnown RBP14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 KCNF1Q9H3M0 494 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 PDE11AQ9HCR9 933 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 RNF19AQ9NV58 838 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 ZNF233A6NK53 670 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 LGALS16A8MUM7 142 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 CLTAP09496 248 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 TRIM49P0CI25 452 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 TRIM49CP0CI26 452 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 ATP2A2P16615 1042 aaKnown RBP14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 PBX1P40424 430 aa14.55□□□□□ -0.08
TRAPPC4-214ENST00000533632 PBX2P40425 430 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms